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Job DescriptionP04391
Confidence97.97%DateThu Jan 5 10:58:15 GMT 2012
Rank52Aligned Residues190
% Identity16%Templatec2j6iC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:formate dehydrogenase; PDBTitle: candida boidinii formate dehydrogenase (fdh) c-terminal2 mutant
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80.........90.........100....... ..110.....
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Query Sequence  SFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYR. . . . . . . . . . . . . . . . . . . . . . . . . . GYGQEIVE
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Template Sequence  GIANWLKDQGHELITTSDKEGNSVLDQHIPD. . . . . . . . ADIIITTPFHPAYITKERIDKAKKLKLVVVAGVGSDHIDLD
Template Known Secondary structure  G
TT
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GGG........
S
TTS


B

TT

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TTB
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   2930.........40.........50......... 60.........70.........80.........90.........100
 
   116...120. ........130.........140........ .150.........160.........170...
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Query Sequence  TLAEYA. SVPVWNGLTNEFHPTQLLADLLTMQEH. . . . . . . . . . . . . . . . . . . . . LPGKAFNEMTLVYAGDARNNMGNSM
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Template Sequence  YINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIG. A. GRIGYRV
Template Known Secondary structure  T



TTSSTTTT


TT


STT

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   102.......110.........120.........130.........140.........150.........160.........170. . .......
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  LEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRE
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Template Sequence  LERLVPFNPKELLYYDYQALPKDAEEKV. . . . . . . . . . GARRVENIEELVAQADIVT. . . . VNAPLHAGTKG. . . . . . . .
Template Known Secondary structure  GGG

S
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   180.........190.........200....... ..210.........220...... ...230.......
 
   254.....260.........270.........280.........290.........300......
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Query Sequence  YQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVF
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Template Sequence  . LINKELLSK. FKKGAWLV. . . . . . . . . . . . . . . . . . . . . NTARGAICVAEDV
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B
TT.S
TT.....................
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GGGB
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   238.240...... ...250.... .....260.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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