Job Description P04391 Confidence 80.15% Date Thu Jan 5 10:58:15 GMT 2012 Rank 232 Aligned Residues 163 % Identity 9% Template c2eggA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																								.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.										.	.	.	.	.	.	.	.	.	.
Query Sequence		F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	.	Y	D	G	I	Q	Y	R	G	Y	.	.	.	.	.	.	.	.	.	.	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	G	L	T	N
Query Conservation																																								.										.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.															.										.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		H	N	D	A	F	A	R	L	G	I	P	A	R	Y	H	L	F	S	V	E	.	.	.	.	P	G	Q	V	G	A	A	I	A	G	V	R	A	L	G	I	A	G	V	N	V	T	I	P	H	K	L	A	V	I	P	F	L	D	E	V	D	E	H	A	R	R	I	G	A	V	N	T	I	I	N	N	D	G	R	L
Template Known Secondary structure									T	T												.	.	.	.	T	T													T								T	T		T	T	T	T	G	G	G		S										T									T	T
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	.	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G
Query Conservation																																																					.
Alig confidence																						.												.	.																		.							.	.	.	.	.
Template Conservation																						.												.	.																									.	.	.	.	.
Template Sequence		V	G	Y	N	T	D	G	L	G	Y	V	Q	A	L	E	E	E	M	N	I	.	T	L	D	G	K	R	I	L	V	I	G	.	.	A	G	G	G	A	R	G	I	Y	F	S	L	L	S	T	A	A	E	R	I	D	M	A	N	.	.	.	.	.	R	T	V	E	K	A	E	R	L	V	R	E	G	D	E	R	R
Template Known Secondary structure																			T	T		.			T	T								.	.		S												T	T	T		S							.	.	.	.	.	S	S											S		S	S	S
Template Predicted Secondary structure																						.												.	.																									.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	Y	F	S	L	A	E	A	E	T	R	L	A	E	Y	D	I	I	I	N	T	T	S	V	G	M
Template Known Secondary structure													T	G	G	G		S						S		T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions