Job Description P04391 Confidence 100.00% Date Thu Jan 5 10:58:15 GMT 2012 Rank 10 Aligned Residues 301 % Identity 34% Template c1zq2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: crystal structure of n-acetyl-l-ornithine transcarbamylase2 complexed with cp Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		K	H	F	L	K	L	L	D	F	T	P	A	E	L	N	S	L	L	Q	L	A	A	K	L	K	A	D	K	K	S	G	K	E	E	A	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	.
Query Conservation																																																																																	.
Alig confidence																												.	.	.	.																																																		.
Template Conservation																												.	.	.	.
Template Sequence		K	H	F	L	N	T	Q	D	W	S	R	A	E	L	D	A	L	L	T	Q	A	A	L	F	K	R	.	.	.	.	N	K	L	G	S	E	L	K	G	K	S	I	A	L	V	F	F	N	P	S	M	R	T	R	T	S	F	E	L	G	A	F	Q	L	G	G	H	A	V	V	L	Q	P	G	K	D	A	W	P	I
Template Known Secondary structure				B	S		G	G	G	S																		.	.	.	.	S					T	T	T	T								S	S			S													T	T								B	T	T	T	B
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
													86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.											.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	.	.	.	.	.	.	.	.	.	.	Y	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																																		.
Template Sequence		E	F	N	L	G	T	V	M	D	G	D	T	E	E	H	I	A	E	V	A	R	V	L	G	R	Y	V	D	L	I	G	V	R	A	F	P	K	F	V	D	W	S	K	D	R	E	D	Q	V	L	K	S	F	A	K	Y	S	P	V	P	V	I	N	M	.	E	T	I	T	H	P	C	Q	E	L	A	H	A	L	A
Template Known Secondary structure				S	S	S					S	S																	S										S	S						T	T												S	S					S	.	S	S	S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.																									.
Query SS confidence																							.	.	.	.	.																									.
Query Sequence		M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	.	.	.	.	.	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	.	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D
Query Conservation																							.	.	.	.	.																									.
Alig confidence																							.	.	.	.	.																									.
Template Conservation
Template Sequence		L	Q	E	H	F	G	T	P	D	L	R	G	K	K	Y	V	L	T	W	T	Y	H	P	K	P	L	N	T	A	V	A	N	S	A	L	T	I	A	T	R	M	G	M	D	V	T	L	L	C	P	T	P	D	Y	I	L	D	E	R	Y	M	D	W	A	A	Q	N	V	A	E	S	G	G	S	L	Q	V	S	H	D
Template Known Secondary structure							T	S	S			T	T											S	S				S													T	T								S	S	G	G	G																		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	.	.	A	K	E	K	W	A	E	R	I	A	L	L	R	E	Y	Q	V	N	S	K	M	M	Q	L	T	G	N	P	E	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H
Query Conservation																							.	.
Alig confidence																							.	.																								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	S	A	Y	A	G	A	D	V	V	Y	A	K	S	W	G	A	L	P	F	F	G	N	W	E	P	E	K	P	I	R	D	Q	Y	Q	H	F	I	V	D	E	R	K	M	A	.	.	L	T	N	N	G	V	F	S	H	C	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R
Template Known Secondary structure							T	T		S										G	G	G	T	T			T	T	T					G	G	G	G	G	G	S	B						T	.	.	T	S	S	S							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.																			.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	M	E	V	T	D	E	V	F	E	S	A	A	S	I	V	F	D	Q	A	E	N	R	M	H	T	I	K	A	V	M	V	A	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	V	K	A	T	D	A	V	M	D	S	P	N	C	I	A	I	D	E	A	E	N	R	L	H	V	Q	K	A	I	M	A	A	L	V
Template Known Secondary structure		B	T	T	T	B						T	S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions