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Job Description | P04391 | Confidence | 87.78% | Date | Thu Jan 5 10:58:15 GMT 2012 |
Rank | 193 | Aligned Residues | 112 |
% Identity | 15% | Template | c1wziA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:malate dehydrogenase; |
PDBTitle: structural basis for alteration of cofactor specificity of2 malate dehydrogenase from thermus flavus
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Resolution | 2.00 Å |
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157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
M | T | L | V | Y | A | G | D | A | R | N | N | M | G | N | S | M | L | E | A | A | A | L | T | G | L | . |
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D | L | R | L | V | A | P | Q | A | C | W | P | E | A | A | L | V | T | E | C | R | A | L | A | Q | Q | N | G | G | . |
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N | I | T | L | T | E | D | V | A | K | G | V | E | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | R | V | A | V | T | G | A | A | . |
G | Q | I | G | Y | S | L | L | F | R | I | A | A | G | E | M | L | G | K | D | Q | P | V | I | L | Q | L | L | G | . |
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S | E | R | S | F | Q | A | L | E | G | V | V | M | E | L | E | D | C | A | F | P | L | L | A | G | L | E | A | T | D | D | P | K | V | A | F | K | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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4 | . | . | . | . | . | 10 | . | . | |
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. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
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226 | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | D | F | I | Y | T | D | V | W | V | S | M | G | E | A | K | E | K | W | A | E | R | I | A | L | L | R | E | Y | Q | V | N | S | K | M | M | Q | L | T | G | N | P | E | V | K | F | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | D | Y | A | L | L | V | G | A | A | P | R | K | A | G | M | E | R | R | D | L | L | Q | V | N | G | K | I | F | T | E | Q | G | R | A | L | A | E | V | A | K | K | D | V | K | V | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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