Job Description P04391 Confidence 34.19% Date Thu Jan 5 10:58:15 GMT 2012 Rank 472 Aligned Residues 139 % Identity 17% Template c1ww8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate oxidoreductase; PDBTitle: crystal structure of malic enzyme from pyrococcus2 horikoshii ot3 Resolution 2.50 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.
Query Sequence		I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	.	.	.	.	.	.	L	R	L
Query Conservation																																																																									.	.	.	.	.	.
Alig confidence																				.																					.																			.	.												.	.	.	.	.	.
Template Conservation																				.																					.																			.	.
Template Sequence		I	L	E	R	L	R	E	E	L	D	I	P	V	F	H	D	D	Q	.	Q	G	T	A	A	V	V	L	A	G	L	L	N	A	L	K	V	V	G	K	.	K	I	S	E	I	T	L	A	L	F	G	A	G	A	A	G	F	A	.	.	T	L	R	I	L	T	E	A	G	V	K	P	E	N	V	R	V	V	E	L
Template Known Secondary structure											S	S								.																		T	T		.		T	T	T									S						.	.									T			G	G	G
Template Predicted Secondary structure																				.																					.																			.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		187	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		V	A	P	Q	A	C	W	.	.	.	.	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	E	Y	Q	V	N	S	K	M	M	Q
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	G	K	P	R	I	L	T	S	D	L	D	L	E	K	L	F	P	Y	R	G	W	L	L	K	K	T	N	G	E	N	I	E	G	G	P	Q	E	A	L	K	D	A	D	V	L	I	S	F	T	R	P	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	K	P	Q	W	I	E
Template Known Secondary structure			T	T							T	T	S						S	T	T						T	T			T	T				S	S						T	T		S									S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.																	.	.	.	280	.	.	.	.
		263	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	G	N	P	E	V	K	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	X	N	E	D	A	I	V	F
Template Known Secondary structure		T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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