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Job DescriptionP04391
Confidence100.00%DateThu Jan 5 10:58:15 GMT 2012
Rank3Aligned Residues331
% Identity58%Templatec1ortD_
PDB info PDB header:transferaseChain: D: PDB Molecule:ornithine transcarbamoylase; PDBTitle: ornithine transcarbamoylase from pseudomonas aeruginosa
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  GFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGS
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Template Sequence  NMHNRNLLSLMHHSTRELRYLLDLSRDLKRAKYTGTEQQHLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSS
Template Known Secondary structure 

TT

BS

S


T



S
TT
SS

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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  QIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYA
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Template Sequence  QIGHKESMKDTARVLGRMYDAIGYRGFKQEIVEELAKFAGVPVFNGLTDEYHPTQMLADVLTMREHSDK. PLHDISYAYL
Template Known Secondary structure 
T

S
S
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SS


S.
GGG
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   83......90.........100.........110.........120.........130.........140.........150. ........160.
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  GDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKE
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Template Sequence  GDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVE
Template Known Secondary structure  S
S
STT


GGGS

TT
S
TTT
S




S
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   243......250.........260.........270.........280.........290.... .....300.........310.........320.
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Query Sequence  KWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFG. LHGGMEVTDEVFESAASIVFDQAENRM
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Template Sequence  AWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYNIAFEQAENRM
Template Known Secondary structure 

GGG
B
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S



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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   322.......330....
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Query Sequence  HTIKAVMVATLSK
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Template Sequence  HTIKAILVSTLAD
Template Known Secondary structure  TS
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   322.......330....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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