Job Description P04391 Confidence 58.73% Date Thu Jan 5 10:58:15 GMT 2012 Rank 329 Aligned Residues 191 % Identity 14% Template c1edzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:5,10-methylenetetrahydrofolate dehydrogenase; PDBTitle: structure of the nad-dependent 5,10-2 methylenetetrahydrofolate dehydrogenase from saccharomyces3 cerevisiae Resolution 2.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		F	L	K	L	L	D	F	T	P	A	E	L	N	S	L	L	Q	L	A	A	K	L	K	A	D	K	K	S	G	K	E	E	A	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	.	C	S	F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	H	K
Query Conservation																																																						.
Alig confidence																																			.	.	.	.	.															.																						.	.	.	.	.
Template Conservation																																			.	.	.	.	.																																					.	.	.	.	.
Template Sequence		T	I	L	A	S	K	V	A	E	T	F	N	T	E	I	I	N	N	V	E	E	Y	K	K	T	H	N	G	Q	G	P	L	L	.	.	.	.	.	V	G	F	L	A	N	N	D	P	A	A	K	M	Y	A	T	W	T	Q	K	T	S	E	S	M	G	F	R	Y	D	L	R	V	I	E	D	.	.	.	.	.	K
Template Known Secondary structure																											T	T	T						.	.	.	.	.																										T									S	S	.	.	.	.	.	G
Template Predicted Secondary structure																																			.	.	.	.	.																																					.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.
		88	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.																							.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure															.	.																												.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.																												.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	I	K	D	T	A	R	V	L	G	R	M	.	.	Y	D	G	I	Q	Y	R	G	Y	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	.	G	L	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	H	P	T	Q	L	L	A	D	L
Query Conservation															.	.																												.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																												.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation																																																																												.
Template Sequence		D	F	L	E	E	A	I	I	Q	A	N	G	D	D	S	V	N	G	I	M	V	Y	F	P	V	F	G	N	A	Q	D	Q	Y	L	Q	Q	V	V	C	K	E	K	D	V	E	G	L	N	H	V	Y	Y	Q	N	L	Y	H	N	V	R	Y	L	D	K	E	N	R	L	K	S	I	L	P	C	.	T	P	L	A	I
Template Known Secondary structure		G	G												T	T								S		S	S	S	S							T	T	T	S		T	T	T	B	T	T			S									T	T			B	S	S	S	S	S		S	B						.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.									.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		L	T	M	Q	E	H	L	P	G	K	.	.	.	.	.	.	.	.	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.														.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	I	L	E	F	L	K	I	Y	N	N	L	L	P	E	G	N	R	L	Y	G	K	K	C	I	V	I	N	R	S	.	E	I	V	G	R	P	L	A	A	L	L	A	N	D	G	A	T	V	Y	S	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	N	I	Q	K
Template Known Secondary structure								T	T		S		T	T	S		T	T		T	T	T	T										.	T	T	T										T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																					.	210	.	.	.	.
		215	.	.	.																					.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	K	G	V	E	G	A	D	F	I	Y	T
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	R	G	E	S	L	K	L	N	K	H	H	V	E	D	L	G	E	Y	S	E	D	L	L	K	K	C	S	L	D	S	D	V	V	I	T
Template Known Secondary structure				S				S	S																									S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions