Job Description P04391 Confidence 98.39% Date Thu Jan 5 10:58:15 GMT 2012 Rank 49 Aligned Residues 244 % Identity 14% Template c1d4fD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:s-adenosylhomocysteine hydrolase; PDBTitle: crystal structure of recombinant rat-liver d244e mutant s-2 adenosylhomocysteine hydrolase Resolution 2.80 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		L	K	L	L	D	F	T	P	A	E	L	N	S	L	L	Q	L	A	A	K	L	K	A	D	K	K	S	G	K	E	E	A	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																													.	.																																.	.	.	.
Template Conservation																																													.	.
Template Sequence		I	G	L	A	A	W	G	R	K	A	L	D	I	A	E	N	E	M	P	G	L	M	R	M	R	E	M	Y	S	A	S	K	P	L	K	G	A	R	I	A	G	C	L	.	.	H	M	T	V	E	T	A	V	L	I	E	T	L	V	A	L	G	A	E	V	R	W	S	S	C	N	I	F	S	T	Q	D	H	A	A
Template Known Secondary structure		G	G	G													T	T												S	S	S		T	T	T	T								.	.			S													T	T								S	S	T	T	T
Template Predicted Secondary structure																																													.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
															86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.																												.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	.	.	.	.	.	.	I	Q	Y	R	G	Y	G	Q	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	T	L	A	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	I	A	K	A	G	I	P	V	F	A	W	K	G	E	T	D	E	E	Y	L	W	C	I	E	Q	T	L	H	F	K	D	G	P	L	N	M	I	L	D	D	G	G	D	L	T	N	L	I	H	T	K	H	P	Q	L	L	S	G	I	R	G	I	S	E	E	T	T	T	G	V	H	N	L	Y	K	M	M	A
Template Known Secondary structure							T	T							S	S												T	T	S			T	T									S	S	S									T		G	G	G	G	T	T								S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		120			.	.	.	.	.	.	.		.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure			.	.								.			.	.	.	.	.	.
Query SS confidence			.	.								.			.	.	.	.	.	.
Query Sequence		Y	.	.	A	S	V	P	V	W	N	.	G	L	.	.	.	.	.	.	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q
Query Conservation			.	.								.			.	.	.	.	.	.
Alig confidence			.	.								.			.	.	.	.	.	.										.													.												.		.
Template Conservation																														.													.												.		.
Template Sequence		N	G	I	L	K	V	P	A	I	N	V	N	D	S	V	T	K	S	K	F	D	N	L	Y	G	C	R	E	.	S	L	I	D	G	I	K	R	A	T	D	V	.	M	I	A	G	K	V	A	V	V	A	G	.	Y	.	G	D	V	G	K	G	C	A	Q	A	L	R	G	F	G	A	R	V	I	I	T	E	I	E
Template Known Secondary structure		T	T				S					S	T	T						T	T	T	T							.													.			T	T	S							.		.	S														T								S
Template Predicted Secondary structure																														.													.												.		.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.		220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	E	Y	Q	V	N	S	K	M	M	Q	L	T	G	N	P	E	V	K
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		P	I	N	A	L	Q	A	A	M	E	G	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	V	T	T	M	D	E	A	C	K	E	G	N	I	F	V	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	V	D	I	I	L	G	R	H	F	E	Q	.	M	K	D	D	A	I
Template Known Secondary structure											T	T	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S		S	B						T	T	.	S		T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.													.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.																		.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H	G	G	M	E	V	T	D	E	V	F	E	S	A
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	C	N	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	F	D	V	E	I	D	V	K	W	L	N	E	N
Template Known Secondary structure						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S		S	B							T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		295	.	.	.	.																					300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions