Job Description P04391 Confidence 100.00% Date Thu Jan 5 10:58:15 GMT 2012 Rank 6 Aligned Residues 309 % Identity 42% Template c1a1sA_ PDB info PDB header:transcarbamylase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: ornithine carbamoyltransferase from pyrococcus furiosus Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	Y	H	K	H	F	L	K	L	L	D	F	T	P	A	E	L	N	S	L	L	Q	L	A	A	K	L	K	A	D	K	K	S	G	K	E	E	A	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	A	G	R	D	L	L	C	L	Q	D	Y	T	A	E	E	I	W	T	I	L	E	T	A	K	M	F	K	I	W	Q	K	I	G	K	P	H	R	L	L	E	G	K	T	L	A	M	I	F	Q	K	P	S	T	R	T	R	V	S	F	E	V	A	M	A	H	L	G	G	H	A	L	Y	L	N	A	Q	D	L
Template Known Secondary structure				T	T			B	S		G	G	G	S																						T					T	T	T	T								S	S																T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	Y	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A
Query Conservation
Alig confidence																																																																						.	.
Template Conservation																																																																						.	.
Template Sequence		Q	L	R	R	G	E	T	I	A	D	T	A	R	V	L	S	R	Y	V	D	A	I	M	A	R	V	Y	D	H	K	D	V	E	D	L	A	K	Y	A	T	V	P	V	I	N	G	L	S	D	F	S	H	P	C	Q	A	L	A	D	Y	M	T	I	W	E	K	K	G	.	.	T	I	K	G	V	K	V	V	Y	V
Template Known Secondary structure			S	S	S	S	S														S							S	S												S	S								S	S																		S	.	.		S	T	T
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		G	D	.	G	N	N	V	A	H	S	L	M	I	A	G	T	K	L	G	A	D	V	V	V	A	T	P	E	G	Y	E	P	D	E	K	V	I	K	W	A	E	Q	N	A	A	E	S	G	G	S	F	E	L	L	H	D	P	V	K	A	V	K	D	A	D	V	I	Y	T	D	V	W	A	S	M	G	Q	E	A	E
Template Known Secondary structure		S		.																T									T	T																		T	T		B					S						T	T	T		S								S	S	T	T			S	T
Template Predicted Secondary structure				.
Template SS confidence
		161	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	A	E	R	I	A	L	L	R	E	Y	Q	V	N	S	K	M	M	Q	L	T	G	N	P	E	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H	G	G	M	E	V	T	D	E	V	F	E	S	A	A	S	I	V	F	D	Q	A	E	N	R	M	H
Query Conservation
Alig confidence			.																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	.	E	E	R	R	K	I	F	R	P	F	Q	V	N	K	D	L	V	K	H	.	A	K	P	D	Y	M	F	M	H	C	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	R	G	E	E	V	T	D	D	V	I	D	S	P	N	S	V	V	W	D	Q	A	E	N	R	L	H
Template Known Secondary structure		T	.		T						G	G	G		B						T	T	.	S		T	T							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	T	T	T	B						T	S	T	T	B
Template Predicted Secondary structure			.																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.																			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	K	A	V	M	V	A	T	L	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	K	A	V	L	A	L	V	M	G	G
Template Known Secondary structure													S
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions