Job Description P0CF91 Confidence 99.93% Date Thu Jan 5 11:31:50 GMT 2012 Rank 1 Aligned Residues 322 % Identity 17% Template d1musa_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Transposase inhibitor (Tn5 transposase) Resolution 1.90

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		18	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure														.																																		.	.	.	.	.	.	.	.
Query SS confidence														.																																		.	.	.	.	.	.	.	.
Query Sequence		P	E	E	L	D	T	S	A	R	N	A	G	.	A	L	T	R	R	R	E	I	R	D	A	A	T	L	L	R	L	G	L	A	Y	G	P	G	G	M	S	L	R	E	V	T	A	.	.	.	.	.	.	.	.	W	A	Q	L	H	D	V	A	T	L	S	D	V	A	L	L	K	R	L	R	N	A	A	D	W	F
Query Conservation														.																																		.	.	.	.	.	.	.	.
Alig confidence														.								.	.	.	.																							.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	W	A	K	S	V	F	S	S	A	A	L	G	D	P	R	R	T	A	.	.	.	.	R	L	V	N	V	A	A	Q	L	A	K	Y	S	G	K	S	I	T	I	S	S	E	G	S	K	A	A	Q	E	G	A	Y	R	F	I	R	N	P	N	V	S	A	E	A	I	R	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T				S	S						.	.	.	.												T	T	T	S						T	T	T													T		T	T								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.														.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		G	I	L	A	A	Q	T	L	A	V	R	A	A	V	T	G	C	T	S	G	K	R	L	R	L	V	D	G	T	A	I	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	G	G	S	A	E	W	R	L	H	M	G	.	.	Y	D	P	H	T	C	Q	F	T	D	F	E	L	T	D	S	R	D	A
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence		.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	K	A	G	A	M	Q	T	V	K	L	A	Q	E	F	P	E	L	L	A	I	E	D	T	T	S	L	S	Y	R	H	Q	V	A	E	E	L	G	K	L	G	S	I	Q	K	A	S	R	G	W	W	V	H	S	V	L	L	L	E	A	T	T	F	R	T	V	G	L	L	H	Q	E	W	W	M	R
Template Known Secondary structure		.	.	.	.	.												T	T		S															S	G	G	G	G	G	S	B		S	S	S	T	T		S														T	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		154	.	.	.																						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	A	Q	T	A	D	E	I	R	I	A	D	R	G	F	G	S	R	P	E	C	I	R	S	L	A	F	G	E	A	D	Y	I	V	R	V	H	W	R	G	L	R	W	L	T	A	E	G	M	R	F	D	M	M
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																														.	.	.	.
Template Conservation																																														.																														.	.	.	.
Template Sequence		P	D	D	P	A	D	A	D	E	K	E	S	G	K	W	L	A	A	A	A	T	S	R	L	R	M	G	S	M	M	S	N	V	I	A	V	C	D	R	E	A	D	I	H	.	A	Y	L	Q	D	K	L	A	H	N	E	R	F	V	V	R	S	K	H	P	R	K	D	V	E	S	G	L	Y	.	.	.	.	L	Y
Template Known Secondary structure			S	S	G	G	G		S	S		G	G	G														G	G	G	G	G	G							G	G	G				.									T	T									S			B		T	T	T		S	B	.	.	.	.
Template Predicted Secondary structure																																														.																														.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		G	F	L	R	G	L	D	C	G	K	N	G	E	T	T	V	.	M	I	G	N	S	G	N	K	K	A	G	A	P	F	P	A	R	L	I	A	V	S	L	P	P	E	K	A	L	I	S	K	T	R	L	L	S	E	N	R	R	K	G	R	V	V	Q	A	E	T	L	E	A	A	G	H	V	L	L	L	T	S	L
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		D	H	L	K	N	Q	P	E	L	G	G	Y	Q	I	S	I	P	Q	K	G	V	V	D	K	R	G	K	R	K	N	R	P	A	R	K	A	S	L	S	L	R	S	G	R	I	T	L	K	Q	G	N	I	T	L	N	A	V	L	A	E	E	I	N	P	P	K	G	E	T	P	L	K	W	L	L	L	T	S	E	P
Template Known Secondary structure						T	S																		S	S																							T	G	G	G												S			S	S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	D	E	Y	S	A	E	Q	V	A	D	C	Y	R	L	R	W	Q	I	E	L	A	F	K	R	L	K	S	L	L	H	L	D	A	L	R	A	K	E	P	E	L	A	K	A	W	I	F	A	N	L	L	A	A	F	L	I	D	D	I	I	Q	P	S	L	D	F	P	P	R	S	A
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		V	E	S	L	A	Q	A	L	R	V	I	D	I	Y	T	H	R	W	R	I	E	E	F	H	K	A	W	K	T	G	A	G	A	E	R	Q	R	M	E	K	P	D	N	L	E	R	M	V	S	I	L	S	F	V	A	V	R	L	L	Q	L	R	E	.	S	F	T	P	P	S	Q	S	A
Template Known Secondary structure			S	S													T	T												T	T	T		G	G	G				S	S																								.								B	G
Template Predicted Secondary structure																																																																	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions