Job Description P0CF91 Confidence 5.92% Date Thu Jan 5 11:31:50 GMT 2012 Rank 31 Aligned Residues 68 % Identity 18% Template c3d1nK_ PDB info PDB header:transcription regulator/dna Chain: K: PDB Molecule:pou domain, class 6, transcription factor 1; PDBTitle: structure of human brn-5 transcription factor in complex2 with corticotrophin-releasing hormone gene promoter Resolution 2.51 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		K	P	E	E	L	D	T	S	A	R	N	A	G	A	L	T	R	R	R	E	I	R	D	A	A	T	L	L	R	L	G	L	A	Y	G	P	G	.	G	M	S	L	R	E	V	T	A	W	A	Q	L	H	D	V	A	T	L	S	D	V	A	L	L	K	R	L	R	N	A	A	D	W	F	G	I
Query Conservation																																							.
Alig confidence												.	.																										.															.	.	.	.
Template Conservation												.	.																																									.	.	.	.
Template Sequence		N	X	E	E	I	R	E	F	A	K	.	.	N	F	K	I	R	R	L	S	L	G	L	T	Q	T	Q	V	G	Q	A	X	T	A	T	E	G	P	A	Y	S	Q	S	A	I	S	R	F	E	K	L	D	.	.	.	.	I	T	P	K	S	A	Q	K	L	K	P	V	L	E	K	W	L	N	E
Template Known Secondary structure												.	.								T	T	T													S	S	S														T		.	.	.	.	S
Template Predicted Secondary structure												.	.																																									.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions