Job Description P42912 Confidence 99.16% Date Thu Jan 5 12:02:11 GMT 2012 Rank 23 Aligned Residues 204 % Identity 13% Template d2okga1 SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like SorC sugar-binding domain-like Resolution 1.65

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.									.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.
Query Sequence		L	K	E	F	H	P	V	Q	T	L	Q	Q	V	E	N	.	.	.	.	.	.	.	.	Y	T	A	L	S	E	R	A	S	E	Y	L	L	A	V	I	R	S	K	P	N	A	V	I	C	L	A	T	G	A	T	P	L	L	T	Y	H	Y	L	V	E	K	I	H	Q	Q	Q	V	D	V	S	Q	L	T	F	V	K
Query Conservation																	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.																		.	.																								.	.	.	.	.
Template Conservation																																										.	.																								.	.	.	.	.
Template Sequence		L	K	E	R	L	N	L	K	D	A	I	I	V	S	G	D	S	D	Q	S	P	W	V	K	K	E	X	G	R	A	A	V	A	C	X	K	K	R	F	S	.	.	G	K	N	I	V	A	V	T	G	G	T	T	I	E	A	V	A	E	X	X	T	P	D	.	.	.	.	.	S	K	N	R	E	L	L	F	V	P
Template Known Secondary structure						S			S						S	S		T	T	T		T																				.	.	S									S														.	.	.	.	.	T	T
Template Predicted Secondary structure																																										.	.																								.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		L	D	E	W	V	D	L	P	L	T	M	P	G	T	C	E	T	F	L	Q	Q	H	I	V	Q	P	L	G	L	R	E	D	Q	L	I	S	F	R	S	E	E	I	N	E	T	E	C	.	.	.	.	E	R	V	T	N	L	I	A	R	K	G	G	L	D	L	C	V	L	G	L	G	K	N	G	H	L	G	L	N
Query Conservation																																																	.	.	.	.
Alig confidence					.	.																									.	.	.	.															.	.	.	.
Template Conservation					.	.																									.	.	.	.
Template Sequence		A	R	G	.	.	G	L	G	K	N	Q	A	N	T	I	C	A	H	X	A	E	K	A	S	G	T	Y	R	L	.	.	.	.	L	F	V	P	G	Q	L	S	Q	G	A	Y	S	S	I	I	E	E	P	S	V	K	E	V	L	N	T	I	K	S	A	S	X	L	V	H	G	I	G	E	A	K	T	X	A	Q	R
Template Known Secondary structure		S			.	.																			T						.	.	.	.						S											T	S												T		S
Template Predicted Secondary structure					.	.																									.	.	.	.
Template SS confidence
		174	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		E	P	G	E	S	L	Q	P	A	C	H	I	S	Q	L	D	A	R	T	Q	Q	H	E	M	L	K	T	A	G	R	P	.	.	V	T	R	G	I	T	L	G	L	K	D	I	L	N	A	R	E	V	L	L	L	V	T	G	E	G	K	Q	D	A	T	D	R	F	L	T	A	K
Query Conservation																																	.	.
Alig confidence																																	.	.
Template Conservation
Template Sequence		R	N	T	P	L	E	D	L	K	K	I	D	D	N	D	A	V	T	E	A	F	G	Y	Y	F	N	A	D	G	E	V	V	H	K	V	H	S	V	G	X	Q	L	D	D	I	D	A	I	P	D	I	I	A	V	A	G	G	S	S	K	A	E	A	I	E	A	Y	F	K	K	P
Template Known Secondary structure		T	T												T	T						T	T					T	T	S							S						G	G	G	G	G	G		S								S	G	G	G								T	T	S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions