Job Description P42912 Confidence 99.61% Date Thu Jan 5 12:02:11 GMT 2012 Rank 21 Aligned Residues 194 % Identity 11% Template d2o0ma1 SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like SorC sugar-binding domain-like Resolution 1.60

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	A	L	S	E	R	A	S	E	Y	L	L	A	V	I	R	S	K	P	N	A	V	I	C	L	A	T	G	A	T	P	L	L	T	Y	H	Y	L	V	E	K	I	H	Q	Q	Q	V	D	V	S	Q	L	T	F	V	K	L	D	E	W	V	D	L	P	L	T	M	P	G	T	C	E	T	F	L	Q	Q	H	I
Query Conservation
Alig confidence																		.																							.	.	.	.																				.											.	.
Template Conservation																		.																							.	.	.	.																				.											.	.
Template Sequence		L	S	D	F	G	D	V	L	T	N	T	L	N	L	L	L	.	P	N	G	E	N	T	I	A	V	X	G	G	T	T	X	A	X	V	A	E	N	X	.	.	.	.	G	S	L	E	T	E	K	R	H	N	L	F	V	P	A	R	G	G	I	.	G	E	A	V	S	V	Q	A	N	S	.	.	I	S	A	V	X
Template Known Secondary structure																		.		S										S									T		.	.	.	.						S	S								S	B	S			.				G	G	G	S				.	.
Template Predicted Secondary structure																		.																							.	.	.	.																				.											.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190			.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		V	Q	P	L	G	L	R	E	D	Q	L	I	S	F	R	S	E	E	I	N	E	T	E	C	.	.	.	.	E	R	V	T	N	L	I	A	R	K	G	G	L	D	L	C	V	L	G	L	G	K	N	G	H	L	G	L	N	E	P	G	E	S	L	Q	P	A	C	H	I	S	Q	L	D	A	R	T	Q	Q	H	E
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.
Template Conservation
Template Sequence		A	N	K	T	G	G	N	Y	R	A	L	Y	V	P	E	Q	L	S	R	E	T	Y	N	S	L	L	Q	E	P	S	I	Q	E	V	L	T	L	I	S	H	A	N	C	V	V	H	S	I	G	R	A	L	H	X	A	A	R	R	K	X	S	D	D	E	X	V	X	L	K	Q	K	N	A	V	A	E	S	F	G	Y
Template Known Secondary structure						T										S	S											T													T		S																T	T												T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		M	L	K	T	A	G	R	P	V	T	R	G	.	.	I	T	L	G	L	K	D	I	L	N	A	R	E	V	L	L	L	V	T	G	E	G	K	Q	D	A	T	D	R	F	L	T	A	K
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		F	F	D	E	E	G	K	V	V	Y	K	I	P	R	I	G	L	Q	L	K	N	L	Q	E	I	P	Y	V	V	A	I	A	G	G	K	T	K	A	K	A	I	R	A	Y	X	K	N	A
Template Known Secondary structure					T	T	S									S	B			G	G	G	G	G	G		S								S	G	G	G									T	T	S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions