Job Description P42912 Confidence 99.80% Date Thu Jan 5 12:02:11 GMT 2012 Rank 17 Aligned Residues 212 % Identity 18% Template d2gnpa1 SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like SorC sugar-binding domain-like Resolution 1.65

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.										.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	E	F	H	P	V	Q	T	L	Q	Q	V	E	N	.	.	.	.	.	.	.	.	.	Y	T	A	L	S	E	R	A	S	E	Y	L	L	A	V	I	R	S	K	P	N	A	V	I	C	L	A	T	G	A	T	P	L	L	T	Y	H	Y	L	V	E	K	I	H	Q	Q	Q	V	D	V	S	Q	L	T	F	V
Query Conservation																	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																	.	.																						.	.	.	.	.	.
Template Conservation																																										.	.																						.	.	.	.	.	.
Template Sequence		V	K	E	K	Y	S	L	E	S	L	E	I	I	P	N	E	F	D	D	T	P	T	I	L	S	E	R	I	S	Q	V	A	A	G	V	L	R	N	L	I	.	.	D	D	N	X	K	I	G	F	S	W	G	K	S	L	S	N	L	V	D	L	I	.	.	.	.	.	.	H	S	K	S	V	R	N	V	H	F	Y
Template Known Secondary structure							T		S									T	T																							.	.		T	T								S											.	.	.	.	.	.						S	S
Template Predicted Secondary structure																																										.	.																						.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		K	L	D	E	W	V	D	L	P	L	T	M	P	G	T	C	E	T	F	L	Q	Q	H	I	V	Q	P	L	G	L	R	E	D	Q	L	I	S	F	R	S	E	E	I	N	E	T	E	C	.	.	.	.	.	E	R	V	T	N	L	I	A	R	K	G	G	L	D	L	C	V	L	G	L	G	K	N	G	H	L	G
Query Conservation																																																		.	.	.	.	.
Alig confidence						.	.																																											.	.	.	.	.
Template Conservation						.	.
Template Sequence		P	L	A	G	.	.	G	P	S	H	I	H	A	K	Y	H	V	N	T	L	I	Y	E	X	S	R	K	F	H	G	E	C	T	F	X	N	A	T	I	V	Q	E	N	K	L	L	A	D	G	I	L	Q	S	R	Y	F	E	N	L	K	N	S	W	K	D	L	D	I	A	V	V	G	I	G	D	F	S	N	K	G
Template Known Secondary structure			S	B		.	.			T	T	S		G	G	G	S													T								S		S	B		S	S									T	S	T	T	T							T	T	S		S										S
Template Predicted Secondary structure						.	.
Template SS confidence
		140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																							.	.	.													.	.	.	.	.
Query SS confidence																							.	.	.													.	.	.	.	.
Query Sequence		L	N	E	P	G	E	S	L	Q	P	A	C	H	I	S	Q	L	D	A	R	T	.	.	.	Q	Q	H	E	M	L	K	T	A	G	R	P	.	.	.	.	.	V	T	R	G	I	T	L	G	L	K	D	I	L	N	A	R	E	V	L	L	L	V	T	G	E	G	K	Q	D	A	T	D	R	F	L	T	A	K	V
Query Conservation																							.	.	.													.	.	.	.	.
Alig confidence																							.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		K	H	Q	W	L	D	X	L	T	E	D	D	F	K	E	L	T	K	V	K	T	V	G	E	I	C	C	R	F	F	D	S	K	G	K	E	V	Y	E	N	L	Q	E	R	T	I	A	I	S	L	E	D	L	K	N	I	P	Q	S	L	A	V	A	Y	G	D	T	K	V	S	S	I	L	S	V	L	R	A	N	L
Template Known Secondary structure				T	T	T	T	T	S											T	T						T	T					T	T	S									T	T	B		B							T	T	S	S								S	G	G	G										T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		231	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	H	L
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions