|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | R | G | T | A | S | G | G | A | S | L | L | K | E | F | H | . |
P | V | Q | T | L | Q | Q | V | E | N | Y | T | A | L | S | E | R | A | S | E | Y | L | L | A | V | I | R | S | K | P | N | A | V | I | C | L | A | T | G | A | T | P | L | L | T | Y | H | Y | L | V | E | K | I | H | Q | Q | Q | V | D | V | S | Q | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
| . |
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
|   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
| . |   |   |
|
|
|
|   |   |
|
|
|
|
|
|   |
|   |
|   |
|   |   |   |
| . | . | . | . | . |
|
| . |   |   |
|
Template Sequence |   |
E | V | T | H | T | P | Q | G | H | R | I | L | A | H | F | V | I | H | I | C | Q | C | I | P | N | W | T | T | K | H | I | I | E | D | S | I | R | D | I | Q | E | K | V | G | . |
K | E | Q | V | I | V | G | L | S | G | G | V | D | S | A | V | T | A | T | L | V | H | K | A | . |
. |
. |
. |
. |
I | G | . |
D | Q | L |
Template Known Secondary structure |   |
S | S | T | T | S | T | T |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T | S |
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  | G | . | G | G |  |
Template Predicted Secondary structure |   |
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
| . |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | |
. | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
|
|
|
|
. | . | |
. | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | F | V | K | L | D | E | W | V | D | L | P | L | T | M | P | G | T | C | E | T | F | L | Q | Q | H | I | . |
. |
. |
V | Q | P | L | G | L | R | E | D | Q | L | I | S | F | R | S | E | E | I | N | E | T | E | C | . |
. |
. |
. |
. |
E | R | V | T | N | L | I | A | R | K | G | G | L | D | L | C | V | L | G | L | G |
Query Conservation |   |
  |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
| . | . | . |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |   | . |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
V | C | V | L | V | D | T | G | L | . |
L | R | L | N | E | V | D | E | V | L | N | V | F | Q | K | H | L | G | A | K | V | I | C | V | D | A | K | D | R | F | M | K | A | L | K | G | I | S | D | P | E | E | K | R | K | I | A | G | E | Q | F | I | R | V | F | E | E | Q | A | K | K | L | N | V | K | W | L | G | Q | G |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |
| . | S |
| T | T |  |  |  |  |  |  |  |  |  | T | T | S | S |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  | T | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T |
|
|  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
256 | . | . | . | 260 | . | . | . | . | |
. | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
  |
  |   |
153 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
K | N |
Query Conservation |   |
  |
|
Alig confidence |   |
|
|
Template Conservation |   |
|   |
Template Sequence |   |
T | I |
Template Known Secondary structure |   |
|
|
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
335 | . |
  |