Return to main results Retrieve Phyre Job Id

Job DescriptionP42912
Confidence23.84%DateThu Jan 5 12:02:11 GMT 2012
Rank71Aligned Residues47
% Identity4%Templatec3oqhB_
PDB info PDB header:ligaseChain: B: PDB Molecule:putative uncharacterized protein yvmc; PDBTitle: crystal structure of b. licheniformis cdps yvmc-blic
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.......
Predicted Secondary structure 
















Query SS confidence 















































Query Sequence  LAVIRSKPNAVICLATGATPLLTYHYLVEKIHQQQVDVSQLTFVKLDE
Query Conservation     
  
    
 



 

   
  
        


  
  
  

Alig confidence 






















.























Template Conservation    
  
 

 





 




 .  
  
  

   
  
 
  

 
Template Sequence  NEILKRRRHVLVGISPFNSRFSE. DYIHRLIAWAVREFQSVSVLLAGK
Template Known Secondary structure 



SSBTT

.
S

T
Template Predicted Secondary structure 











.






Template SS confidence 















































   23......30.........40..... ....50.........60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions