Job Description P42912 Confidence 99.62% Date Thu Jan 5 12:02:11 GMT 2012 Rank 20 Aligned Residues 197 % Identity 15% Template c3nzeB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator, sugar-binding family; PDBTitle: the crystal structure of a domain of a possible sugar-binding2 transcriptional regulator from arthrobacter aurescens tc1. Resolution 1.70 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	S	E	R	A	S	E	Y	L	L	A	V	I	R	S	K	P	N	A	V	I	C	L	A	T	G	A	T	P	L	L	T	Y	H	Y	L	V	E	K	I	H	Q	Q	Q	V	D	V	S	Q	L	T	F	V	K	L	D	E	W	V	D	L	P	L	T	M	P	G	T	C	E	T	F	L	Q	Q	H	I	V
Query Conservation
Alig confidence																	.	.																						.	.	.	.	.	.																		.
Template Conservation																	.	.																						.	.	.	.	.	.																		.
Template Sequence		D	R	V	A	X	Q	A	A	R	T	I	G	P	L	V	.	.	D	S	N	A	I	I	G	V	A	W	G	A	T	L	S	A	V	S	R	H	L	.	.	.	.	.	.	T	R	K	X	T	H	D	S	I	V	V	Q	L	N	G	A	G	.	N	X	Q	T	T	G	I	T	Y	A	S	D	I	X	R	R	F	G
Template Known Secondary structure													G	G	G		.	.		T	T								S								T	T		.	.	.	.	.	.						S	S							S				.		T	T	S		S
Template Predicted Secondary structure																	.	.																						.	.	.	.	.	.																		.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.											.	.	.	.	170	.	.	.
Predicted Secondary structure																									.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	L	G	L	R	E	D	Q	L	I	S	F	R	S	E	E	I	N	E	T	E	C	.	.	.	.	.	E	R	V	T	N	L	I	A	R	K	G	G	L	D	L	C	V	L	G	L	G	K	N	G	H	L	G	L	N	E	P	G	E	S	.	.	.	.	.	.	.	.	.	.	L	Q	P	A	C	H	I	S
Query Conservation																									.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	Y	G	A	R	V	E	Q	F	P	V	P	A	F	F	D	H	A	S	T	K	T	A	X	W	N	E	R	S	V	Q	R	I	L	D	L	Q	A	R	X	S	I	A	I	F	G	V	G	S	V	D	S	D	Y	P	S	H	V	Y	A	G	G	Y	L	D	E	H	D	L	T	X	L	A	A	D	D	V	V	G
Template Known Secondary structure					T								S		S	S		S									T	T												T	T		S											S	S	S	T	T	S			T	T	S	S	S		G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	D	A	R	T	Q	Q	H	E	M	L	K	T	A	G	R	P	V	T	R	G	I	T	L	G	L	K	D	I	L	N	A	R	E	V	L	L	L	V	T	G	E	G	K	Q	D	A	T	D	R	F	L	T	A	K	V	S	T	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	A	T	V	F	F	R	S	D	G	S	S	D	G	I	T	L	N	E	R	S	T	G	P	S	H	E	Q	L	R	Q	V	R	R	R	I	C	V	V	S	G	A	S	K	I	N	G	L	Q	G	A	L	A	A	G	L	A	T	D	L
Template Known Secondary structure				T	T					T	T	S			T	T		G	G	G	G	G			S							T	T	S	S								S	G	G	G										T	T			S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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