Return to main results Retrieve Phyre Job Id

Job DescriptionP42912
Confidence100.00%DateThu Jan 5 12:02:11 GMT 2012
Rank2Aligned Residues231
% Identity23%Templatec3hn6D_
PDB info PDB header:isomeraseChain: D: PDB Molecule:glucosamine-6-phosphate deaminase; PDBTitle: crystal structure of glucosamine-6-phosphate deaminase from borrelia2 burgdorferi
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40... ......50.........60.........70.........80.........90.....
Predicted Secondary structure 

.....























Query SS confidence 






















. . . . .



















































Query Sequence  TLQQVENYTALSERASEYLLAVI. . . . . RSKPNAVICLATGATPLLTYHYLVEKIHQQQVDVSQLTFVKLDEWVDLPLTM
Query Conservation 
  
  
 
 
   

  
   
.....  
    
 



 

   
  
        


  
  
  


  
    
Alig confidence 






















.....



















































Template Conservation 

 
      
    
  
   
            








   
  
        


  
  
  


  
    
Template Sequence  RLIIRPTYEDISKWAANHVAQKINEFSPTKENPFILGLPTGSSPIGMYKNLIELNKNKKISFQNVITFNMDEYIGIEENH
Template Known Secondary structure  SS


SSS


SSTTTTS


TTSTT

TTS
Template Predicted Secondary structure 

























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   96...100.........110.........120...... ...130.........140.........150.........160.........170....
Predicted Secondary structure 













.




















Query SS confidence 






























.















































Query Sequence  PGTCETFLQQHIVQPLGLREDQLISFRSEEI. NETECERVTNLIARKGGLDLCVLGLGKNGHLGLNEPGESLQPACHISQ
Query Conservation    

   
   
     
    
        .       
   
      

 




 









           
Alig confidence 






























.















































Template Conservation    

       

    

   
                
   
      

 




 


 

  
            
Template Sequence  PESYHSFMWNNFFSHIDIKKENINILNGNASNLKKECEEYEKKIKSFGGIMLFVGGIGPDGHIAFNEPGSSLTSRTRIKT
Template Known Secondary structure  TTSTGGGS


GGG


TT
S
TTS
S

TTS
BTTB
TT

TT

S
Template Predicted Secondary structure 



































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   175....180.. .......190.........200.........210.........220.........230.........240.........250.
Predicted Secondary structure 





...


























Query SS confidence 







. . .




































































Query Sequence  LDARTQQH. . . EMLKTAGRPVTRGITLGLKDILNAREVLLLVTGEGKQDATDRFLTAKVSTAIPASFLWLHSNFICLINT
Query Conservation 
   
   ...         
  




   
  
  
 
   
  

 

   
        


 
  
       
 
Alig confidence 







...




































































Template Conservation 
   
               
  





  
  
  
     
  

  
   
        


 
  
       
 
Template Sequence  LTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIVSDK
Template Known Secondary structure 

TTTTT
STTS
S

TSS

SGGGTS


TTSGGGGGGG
SSS
Template Predicted Secondary structure 



































Template SS confidence 















































































   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions