Job Description P42912 Confidence 99.73% Date Thu Jan 5 12:02:11 GMT 2012 Rank 18 Aligned Residues 199 % Identity 13% Template c2w48D_ PDB info PDB header:transcription Chain: D: PDB Molecule:sorbitol operon regulator; PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae Resolution 3.20 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		Y	T	A	L	S	E	R	A	S	E	Y	L	L	A	V	I	R	S	K	P	N	A	V	I	C	L	A	T	G	A	T	P	L	L	T	Y	H	Y	L	V	E	K	I	H	Q	Q	Q	V	D	V	S	Q	L	T	F	V	K	L	D	E	W	V	D	L	P	L	T	M	P	G	T	C	.	E	T	F	L	Q	Q	H
Query Conservation																																																																										.
Alig confidence																		.	.																									.	.	.	.	.														.	.											.
Template Conservation																		.	.																									.	.	.	.	.														.	.
Template Sequence		L	S	A	M	G	Q	H	G	A	L	L	V	D	R	L	L	.	.	E	P	G	D	I	I	G	F	S	W	G	R	A	V	R	S	L	V	E	N	L	P	Q	R	.	.	.	.	.	S	Q	S	R	Q	V	I	C	V	P	I	I	G	.	.	G	P	S	G	K	L	E	S	R	Y	H	V	N	T	L	T	Y	G
Template Known Secondary structure																		.	.		T	T								S									T					.	.	.	.	.	S	S									S	B		.	.	B		T	T	S	S		G	G	G
Template Predicted Secondary structure																		.	.																									.	.	.	.	.														.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		I	V	Q	P	L	G	L	R	E	D	Q	L	I	S	F	R	S	E	E	I	N	E	T	E	C	.	.	.	.	.	E	R	V	T	N	L	I	A	R	K	G	G	L	D	L	C	V	L	G	L	G	K	N	G	H	L	G	L	N	E	P	G	E	S	L	Q	P	A	C	H	I	S	Q	L	D	A	R	T	Q	Q
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																																								.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		A	A	A	R	L	K	A	E	S	H	L	A	D	F	P	A	L	L	D	N	P	L	I	R	N	G	I	M	Q	S	Q	H	F	K	T	I	S	S	Y	W	D	S	L	D	V	A	L	V	G	I	G	S	P	A	I	R	D	G	A	N	W	H	A	F	Y	G	S	E	E	.	.	.	.	S	D	D	L	N	A	R
Template Known Secondary structure							T								S	B	S	B		S										T	S											T	T									B		T	T			S	S	S						T	T	T			.	.	.	.							T
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.
		182	.								.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.																																															.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.																																															.	.	.	.	.
Query Sequence		H	E	.	.	.	.	.	.	.	M	L	K	T	A	G	R	P	V	T	R	G	I	T	L	G	L	K	D	I	L	N	A	R	E	V	L	L	L	V	T	G	E	G	K	Q	D	A	T	D	R	F	L	T	A	K	.	.	.	.	.	V	S	T	A	I	P	A	S	F	L
Query Conservation				.	.	.	.	.	.	.																																															.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.																																															.	.	.	.	.
Template Conservation
Template Sequence		H	V	A	G	D	I	C	S	R	F	Y	D	I	N	G	G	L	S	E	K	T	L	S	I	E	M	A	K	L	R	Q	A	R	Y	S	I	G	I	A	M	G	E	E	K	Y	S	G	I	L	G	A	L	H	G	R	Y	I	N	C	L	V	T	N	R	E	T	A	E	L	L
Template Known Secondary structure		T						T	T					T	T	S					S	B		B								T	S	S									S	S	S										T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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