Job Description P42912 Confidence 48.28% Date Thu Jan 5 12:02:11 GMT 2012 Rank 45 Aligned Residues 86 % Identity 16% Template c2q4dB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lysine decarboxylase-like protein at5g11950; PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at5g11950 Resolution 2.15 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		L	A	V	I	R	S	K	P	N	A	V	I	C	L	A	T	G	A	T	P	L	L	T	Y	H	Y	L	V	E	K	I	.	.	H	Q	Q	Q	V	D	V	S	Q	L	T	F	V	K	L	D	E	W	V	D	L	P	L	T	M	P	G	T	C	E	T	F	L	Q	Q	H	I	V	Q	P	L	G	L	R	E	D	Q
Query Conservation																																	.	.
Alig confidence																			.	.	.												.	.																				.	.	.	.	.	.	.								.
Template Conservation																			.	.	.																																	.	.	.	.	.	.	.								.
Template Sequence		K	A	A	X	A	Q	E	A	E	A	F	I	A	L	P	G	G	.	.	.	Y	G	T	X	E	E	L	L	E	X	I	T	W	S	Q	L	G	I	H	K	K	T	V	G	L	L	N	V	D	G	Y	Y	.	.	.	.	.	.	.	N	N	L	L	A	L	F	.	D	T	G	V	E	E	G	F	I	K	P	G	A
Template Known Secondary structure								T		S	B					S		S	.	.	.																	T	S										G	G	G	T	T	.	.	.	.	.	.	.								.							T	S	S		T	T	G
Template Predicted Secondary structure																			.	.	.																																	.	.	.	.	.	.	.								.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	S	F	R	S	E	E	I	N	E	T	E	C	E	R	V	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	I	V	V	S	A	P	T	A	K	E	L	X	E	K	X	E	E
Template Known Secondary structure		G	G	G					S	S										S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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