Job Description P42912 Confidence 13.37% Date Thu Jan 5 12:02:11 GMT 2012 Rank 90 Aligned Residues 123 % Identity 15% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.
Query Sequence		E	N	Y	T	A	L	S	E	R	A	S	E	Y	L	L	A	V	I	R	S	K	P	N	A	V	I	C	L	A	T	.	.	.	.	.	.	.	G	A	T	P	L	L	T	Y	H	Y	L	V	E	K	I	H	Q	Q	Q	V	D	V	S	Q	L	T	F	V	K	L	D	E	W	V	D	L	P	L	T	M	P	G	T
Query Conservation																																.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		K	S	T	S	E	S	L	H	I	L	K	Q	V	N	N	D	A	Q	K	A	N	L	T	T	R	A	Y	L	S	T	V	F	G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R	L	S	E	A	L	F	E	F	G	I	S	E	.	.	.	.	L	S	L	G	D	T	I	G	A	A	N	P	A	Q	V	E	T
Template Known Secondary structure		S																			T	T										T	T		B	T	T	T	B																		T		S		.	.	.	.						S	S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.								.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.
Query Sequence		C	E	T	F	L	Q	Q	H	I	V	Q	P	L	G	L	R	E	D	Q	L	I	S	F	R	S	E	E	I	N	E	T	E	C	E	R	V	T	N	L	I	A	R	K	G	G	L	D	L	C	V	L	G	L	G	.	.	.	.	.	.	.	K	N	G	H	L	G
Query Conservation																																																								.	.	.	.	.	.	.
Alig confidence											.							.	.	.										.	.																									.	.	.	.	.	.	.
Template Conservation											.							.	.	.										.	.
Template Sequence		V	L	E	A	L	L	A	R	F	.	P	A	N	Q	I	A	.	.	.	L	H	F	H	D	T	R	G	T	.	.	A	L	A	N	X	V	T	A	L	Q	X	G	I	T	V	F	D	G	S	A	G	G	L	G	G	C	P	Y	A	P	G	S	S	G	N	A	A
Template Known Secondary structure								T	T	S	.		G	G	G			.	.	.				B	G	G	G	S		.	.												T							B	G	G	G					T	T							B		B
Template Predicted Secondary structure											.							.	.	.										.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.		200	.	.	.	.	.				.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions