Return to main results Retrieve Phyre Job Id

Job DescriptionP42912
Confidence100.00%DateThu Jan 5 12:02:11 GMT 2012
Rank7Aligned Residues219
% Identity17%Templatec1y89B_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:devb protein; PDBTitle: crystal structure of devb protein
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  LQQVENYTALSERASEYLLAVIRSKPNAVICLATGATPLLTYHYLVEKIHQQQVDVSQLTFVKLDEWVDLPLTMPGTCET
Query Conservation    
  
 
 
   

  
   
  
    
 



 

   
  
        


  
  
  


  
      

  
Alig confidence 



































































.










Template Conservation    

     

   
  
   
       
 






  

  
        
 
  
  
  


 .
      

  
Template Sequence  HKIFPTADAVVKSLADDXLAYSQQGQPVHISLSGGSTPKXLFKLLASQPYANDIQWKNLHFWWGDERC. VAPDDAESNYG
Template Known Secondary structure  SSTSSS


STSTTS
GGGSS.S
TTSTT
Template Predicted Secondary structure 



















.




Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70. ........80..
 
   102.......110.........120.........130.........140. ........150.........160.........170....
Predicted Secondary structure 














.......



















Query SS confidence 







































. . . . . . .
































Query Sequence  FLQQHIVQPLGLREDQLISFRSEEINETECERVTNLIARK. . . . . . . GGLDLCVLGLGKNGHLGLNEPGESLQPACHISQ
Query Conservation   
   
     
    
               
   
   .......   

 




 









           
Alig confidence 







































.......
































Template Conservation       

    
    
            
                    

 




 


 




            
Template Sequence  EANALLFSKINXPAQNIHRILGENEPQAEAERFAQAXAHVIPTENGTPVFDWILLGVGADGHTASLFPGQTDYADANLSV
Template Known Secondary structure  TGGGS


GGGB



TTS
S
TT

S


TTS
BTTB
TTT

TT

SS
Template Predicted Secondary structure 
































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   175....180.........190.........200.........210.........220.........230.. .......240.... .....250.
Predicted Secondary structure 

























.





.
Query SS confidence 

























































.











.






Query Sequence  LDARTQQHEMLKTAGRPVTRGITLGLKDILNAREVLLLVTGEGKQDATDRFLTAKVST. AIPASFLWLHSN. FICLINT
Query Conservation 
   
            
  




   
  
  
 
   
  

 

   
      .  


 
  
  .     
 
Alig confidence 
..........














































.











.






Template Conservation   ..........      
  




   
  
  
  
  
  

  
   
         


 
        
  
 
Template Sequence  V. . . . . . . . . . ASHPESGQLRVSKTAKVLQAAKRISYLVLGAGKAEIVEQIHTTPAEQLPYPAAKIHSTSGVTEWYLDS
Template Known Secondary structure  ..........
TTT


SS
SGGGS
GGG





SSST
Template Predicted Secondary structure  ..........





























Template SS confidence 














































































   163 ......170.........180.........190.........200.........210.........220.........230.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions