Job Description P42912 Confidence 12.44% Date Thu Jan 5 12:02:11 GMT 2012 Rank 95 Aligned Residues 79 % Identity 10% Template c1rcuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved hypothetical protein vt76; PDBTitle: x-ray structure of tm1055 northeast structural genomics2 consortium target vt76 Resolution 2.50 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	R	S	K	P	N	A	V	I	C	L	A	T	G	A	T	P	L	L	T	Y	H	Y	L	V	E	K	I	H	Q	Q	Q	V	D	V	S	Q	L	T	F	V	K	L	D	E	W	V	D	L	P	L	T	M	P	G	T	C	E	T	F	L	Q	Q	H	I	V	Q	P	L	G	L	R	E	D	Q	L	I	S
Query Conservation
Alig confidence																		.	.	.																	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.																	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	L	L	R	N	A	D	V	V	V	S	I	G	G	E	.	.	.	I	G	T	A	I	E	I	L	G	A	Y	A	L	G	K	P	.	.	.	.	V	I	L	L	R	G	T	G	G	W	T	.	.	.	.	.	.	.	.	.	.	D	R	I	S	Q	V	L	I	D	G	K	Y	L	D	N	R	R	I	V	E
Template Known Secondary structure						T	T		S						S			.	.	.														T			.	.	.	.					T	T	S					.	.	.	.	.	.	.	.	.	.			G	G	G	G		B	T	T	T	B	S	S	T	T			S
Template Predicted Secondary structure																		.	.	.																	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.											.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	S	E	E	I	N	E	T	E	C	E	R	V	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	H	Q	A	W	T	V	E	E	A	V	Q	I	I	E	Q
Template Known Secondary structure						S	S										T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions