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3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
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. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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| . | . | . |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
T | T | L | F | R | W | P | V | R | V | Y | Y | E | D | T | D | A | G | G | V | V | Y | H | A | S | Y | V | A | F | Y | E | R | A | R | T | E | M | L | R | H | H | H | F | S | . |
. |
. |
Q | Q | A | L | M | A | E | R | V | A | F | V | V | R | K | M | T | V | E | Y | Y | A | P | A | R | L | D | D | M | L | E | I | Q |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |
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|   |
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|   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
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Alig confidence |   |
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Template Conservation |   |
|   |   |
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|   |   |   |
|   |
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|   |
|   |   |   |   |
|   |   |   |   |   |   |
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|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
Template Sequence |   |
A | R | S | I | T | M | Q | Q | R | I | E | F | G | D | C | D | P | A | G | I | V | W | Y | P | N | Y | H | R | W | L | D | A | A | S | R | N | Y | F | I | K | C | G | L | P | P | W | R | Q | T | V | V | E | R | G | I | V | G | T | P | I | V | S | C | N | A | S | F | V | C | T | A | S | Y | D | D | V | L | T | I | E |
Template Known Secondary structure |   |
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|  |  |  |  |  |  |  |
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| G | G | G | B |
| T | T | S | S | B |
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
| S |
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| T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
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  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
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. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
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. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
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Query SS confidence |   |
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| . |
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Query Sequence |   |
T | E | I | T | S | M | R | G | T | S | L | V | F | T | Q | R | I | V | N | . |
. |
. |
. |
A | E | N | T | L | L | N | E | A | E | V | L | V | V | C | V | . |
. |
D | P | L | K | M | K | P | R | A | L | P | K | S | I | V | A | E | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   | . | . |
|   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . |
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| . | . |
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Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |
Template Sequence |   |
T | C | I | K | E | W | R | R | K | S | F | V | Q | R | H | S | V | S | R | T | T | P | G | G | D | V | Q | L | V | M | R | A | D | E | I | R | V | F | A | M | N | D | G | E | R | L | R | A | I | E | V | P | A | D | Y | I | E | L | C |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |