Job Description P0A8Z3 Confidence 98.00% Date Thu Jan 5 11:09:02 GMT 2012 Rank 68 Aligned Residues 102 % Identity 18% Template c3bnvD_ PDB info PDB header:unknown function Chain: D: PDB Molecule:cj0977; PDBTitle: crystal structure of cj0977, a sigma28-regulated virulence protein2 from campylobacter jejuni. Resolution 2.60 Å

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		7	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		R	W	P	V	R	V	Y	Y	E	.	D	T	D	A	G	G	V	V	Y	H	A	S	Y	V	A	F	Y	E	R	A	R	T	E	M	L	R	H	H	H	F	S	Q	Q	A	L	M	A	E	R	V	A	F	V	V	R	K	M	T	V	E	Y	Y	A	P	A	R	L	D	D	M	L	E	I	Q	T	E	I	T	S	M
Query Conservation											.
Alig confidence											.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	I	L	I	T	T	S	E	X	V	A	D	D	Q	G	L	I	F	D	A	F	I	F	A	A	A	N	Y	V	A	Q	A	S	I	.	.	.	.	.	.	.	.	.	.	.	.	N	K	E	F	S	V	I	I	G	S	K	C	F	F	Y	A	P	L	K	L	G	D	V	L	E	L	E	A	H	A	L	F	D
Template Known Secondary structure									G	G	G	B	S	S	T	T		B	B		T																.	.	.	.	.	.	.	.	.	.	.	.			S	S												S			B	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.													.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	T	S	L	V	F	T	Q	R	I	V	N	A	E	N	T	L	L	N	E	A	E	V	L	V	V	C	V	D	P	L	K	M	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	S	K	K	R	D	V	K	V	V	G	H	V	K	E	I	K	X	F	E	G	T	I	Q	V	V	S	T	D	E	H	I	F	K
Template Known Secondary structure		S	S		S											T	T														S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions