Job Description P0A7G6 Confidence 100.00% Date Thu Jan 5 11:05:38 GMT 2012 Rank 12 Aligned Residues 244 % Identity 23% Template c3io5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4 Resolution 2.40 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																								.	.	.																								.	.
Query SS confidence																								.	.	.																								.	.
Query Sequence		T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	.	.	.	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	.	.	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N
Query Conservation																								.	.	.																								.	.
Alig confidence																.								.	.	.																								.	.
Template Conservation																.
Template Sequence		V	V	R	T	K	I	P	M	M	N	I	A	L	S	.	G	E	I	T	G	G	M	Q	S	G	L	L	I	L	A	G	P	S	K	S	F	K	S	N	F	G	L	T	M	V	S	S	Y	M	R	Q	Y	P	D	A	V	C	L	F	Y	D	S	E	F	G	I	T	P	A	Y	L	R	S	M	G	V	D	P	E	R
Template Known Secondary structure						S										.	S	S	T	T					S									S	S	S	S																	T	T								S	S											T	T			G	G	G
Template Predicted Secondary structure																.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	.	.	.	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I
Query Conservation																					.	.	.
Alig confidence																					.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	H	T	P	V	Q	S	L	E	Q	L	R	I	D	M	V	N	Q	L	D	A	I	E	R	G	E	K	V	V	V	F	I	D	S	L	G	N	L	A	S	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	K	T	M	K	S	L	F	R	I	V	T	P	Y	F	S	T	K	N	I	P	C	I
Template Known Secondary structure								S	B														T			T	T										S	T	T		B				.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.														.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	N	Q	I	R	M	K	I	G	V	M	F	G	N	P	E	T	T	T	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I	L	Y	G	E	G	I	N	F
Query Conservation
Alig confidence																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	N	H	T	Y	T	G	P	M	Y	S	A	D	T	V	.	F	I	I	G	K	R	Q	F	V	L	N	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	R	T	V	K	E	K	S	K	F	F	I	D	V	K	F	D	G	G	I	D	P
Template Known Secondary structure										G	G	G	G	S	S			.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	B		T	T							B		T	T	S		B		T
Template Predicted Secondary structure																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220																												.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.														310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	E	L	V	D	L	G	V	K	E	K	L	I	E	K	A	G	A	W	Y	S	.	.	.	Y	K	G	E	K	I	G	Q	G	K	A	N	A	T	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	D	N	P	E	T	A	K	E	I	E	K	K	V	R
Query Conservation																								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	G	L	L	D	M	A	L	E	L	G	F	V	V	K	P	K	N	G	W	Y	A	R	E	F	L	D	E	E	T	G	E	M	I	R	E	E	K	S	W	R	A	K	D	T	N	C	T	T	F	W	G	P	L	F	K	H	Q	P	F	R	D	A	I	K	R	A	Y	Q
Template Known Secondary structure		T	T	T									T	S				S	S	T	T		B							T	T	T	T						S			B						S	S									T													B
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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