Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7G6
Confidence98.18%DateThu Jan 5 11:05:38 GMT 2012
Rank80Aligned Residues115
% Identity21%Templatec3dm5A_
PDB info PDB header:rna binding protein, transport proteinChain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus.
Resolution2.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80.........90.........100........ .110.........120.........130.....
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Query Sequence  RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKL. . . . . GVDIDNLLCSQPDTGEQALEICDALAR
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Template Sequence  TILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCS. DTWRPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYFK
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TTSSTTT


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SSTGGGT


TT


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   101........110.........120.........130...... ...140.........150.........160.........170.........
 
   136...140.........150.........160.........170.........180.........190..
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Query Sequence  SGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIF
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Template Sequence  SKGVDIIIVDTAGRHK. . . . . . . . . . . . . . . . EDKALIEEMKQISNVIHPHEVILVI
Template Known Secondary structure  TT
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   180.........190..... ....200.........210.........220
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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