Job Description P0A7G6 Confidence 95.37% Date Thu Jan 5 11:05:38 GMT 2012 Rank 382 Aligned Residues 79 % Identity 18% Template c3crqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.									.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	.	.	.	.	.	.	.	.	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	.	.	.	.	.	.	.	G	E	Q	A
Query Conservation																																						.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence																									.	.	.											.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																									.	.	.
Template Sequence		A	I	F	L	M	G	P	T	A	A	G	K	T	D	L	A	M	A	L	A	D	A	L	.	.	.	P	C	E	L	I	S	V	D	S	A	L	I	Y	R	G	M	D	I	G	T	A	K	P	S	R	E	L	L	A	R	Y	P	H	R	L	I	D	I	R	D	P	A	E	S	Y	S	A	A	E	F	R	A	D	A
Template Known Secondary structure								S	T	T	S	S										T	T	S	.	.	.									T	T	T	T	B	T	T			T	T	T	T										S				S	S	S		B		T	T	S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	A	M	A	K	A	T	A	R	G	R	I	P	L	L	V
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions