Job Description P0A7G6 Confidence 97.99% Date Thu Jan 5 11:05:38 GMT 2012 Rank 95 Aligned Residues 116 % Identity 18% Template c3a5dM_ PDB info PDB header:hydrolase Chain: M: PDB Molecule:v-type atp synthase beta chain; PDBTitle: inter-subunit interaction and quaternary rearrangement2 defined by the central stalk of prokaryotic v1-atpase Resolution 4.80 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.																				.	.	.	.
Query SS confidence																																																							.	.	.	.																				.	.	.	.
Query Sequence		D	R	S	M	D	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	.	.	.	.	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	.	.	.	.
Query Conservation																																																							.	.	.	.																				.	.	.	.
Alig confidence																							.	.	.																														.	.	.	.																				.	.	.	.
Template Conservation																							.	.	.
Template Sequence		A	R	R	K	P	E	Q	F	I	Q	T	G	I	S	T	I	D	V	M	N	T	.	.	.	L	V	R	G	Q	K	L	P	I	F	S	G	S	G	L	P	A	N	E	I	A	A	Q	I	A	R	Q	A	T	V	R	P	K	E	E	P	F	A	V	V	F	A	A	M	G	I	T	Q	R	E	L	S	Y	F	I	Q
Template Known Secondary structure			S					S	B		B		S						T	T	S		.	.	.		B	T	T		B							T	T	S														B						S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
			105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.										.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.																			.	.	.	.	.	.	.	.	.													.
Query SS confidence		.																			.	.	.	.	.	.	.	.	.													.
Query Sequence		.	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	.	.	.	.	.	.	.	.	.	G	E	Q	A	L	E	I	C	D	A	L	A	.	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T
Query Conservation		.																			.	.	.	.	.	.	.	.	.													.
Alig confidence		.																			.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		E	F	E	R	T	G	A	L	S	R	S	V	L	F	L	N	K	A	D	D	P	T	I	E	R	I	L	T	P	R	M	A	L	T	V	A	E	Y	L	A	F	E	H	D	Y	H	V	L	V	I	L	T	D	M	T	N	Y	C
Template Known Secondary structure							S	G	G	G	G								T	T	S																							S										T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions