Job Description P0A7G6 Confidence 98.21% Date Thu Jan 5 11:05:38 GMT 2012 Rank 79 Aligned Residues 113 % Identity 17% Template c3a5dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:v-type atp synthase alpha chain; PDBTitle: inter-subunit interaction and quaternary rearrangement2 defined by the central stalk of prokaryotic v1-atpase Resolution 4.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.							.	.	.
Query SS confidence																																																																							.	.							.	.	.
Query Sequence		R	S	M	D	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	.	.	I	Y	A	R	K	L	.	.	.
Query Conservation																																																																							.	.							.	.	.
Alig confidence																						.	.	.																											.	.																			.	.							.	.	.
Template Conservation																						.	.	.																											.	.
Template Sequence		K	L	D	P	N	T	P	F	L	T	G	M	R	I	L	D	V	L	F	P	.	.	.	V	A	M	G	G	T	A	A	I	P	G	P	F	G	S	G	K	T	V	T	Q	Q	S	L	A	K	.	.	W	S	N	A	D	V	V	V	Y	V	G	C	G	E	R	G	N	E	M	T	D	V	L	V	E	F	P	E	L
Template Known Secondary structure					S		S	B				S								S		.	.	.		B	T	T								S	T	T	S	S											.	.		S	S		S								S			T	T	T	T					T	T	G	G	G
Template Predicted Secondary structure																						.	.	.																											.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
									109	110	.	.	.	.	.	.	.	.	.	120	.	.										.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	.	.	.	.	.	.	.	.	.	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T
Query Conservation		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	P	K	T	G	G	P	L	M	H	R	T	V	L	I	A	N	T	S	N	M	P	V	A	A	R	E	A	S	I	Y	V	G	V	T	I	A	E	Y	F	R	D	Q	G	F	S	V	A	L	M	A	D	S	T	S	R	W	A
Template Known Secondary structure				T	T	T	T			G	G	G	G								T	T	S																						T	T								S
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions