Job Description P0A7G6 Confidence 99.96% Date Thu Jan 5 11:05:38 GMT 2012 Rank 29 Aligned Residues 249 % Identity 17% Template c2q6tB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dnab replication fork helicase; PDBTitle: crystal structure of the thermus aquaticus dnab monomer Resolution 2.90 Å

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		8	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure													.																																																																				.
Query SS confidence													.																																																																				.
Query Sequence		Q	K	A	L	A	A	A	L	G	Q	I	.	E	K	Q	F	G	K	G	S	I	M	R	L	G	E	D	R	S	M	D	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	.
Query Conservation													.																																																																				.
Alig confidence													.																																			.	.																																.
Template Conservation																																																.	.
Template Sequence		D	E	I	L	D	T	A	G	K	K	I	L	E	V	A	L	A	R	P	M	R	E	L	V	H	E	T	F	E	H	I	E	A	L	V	R	T	G	F	K	E	L	D	Q	L	I	.	.	G	T	L	G	P	G	S	L	N	I	I	A	A	R	P	A	M	G	K	T	A	F	A	L	T	I	A	Q	N	A	A	L
Template Known Secondary structure																T																							S									.	.					T	T									T	T	S	S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.																						.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Query SS confidence																			.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Query Sequence		R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	.	.	.	.	I	Y	A	R	K	L	G	V	D	I	D	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	S	Q	P	D	.	.	.	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G
Query Conservation																			.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Alig confidence																			.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation
Template Sequence		K	E	G	V	G	V	G	I	Y	S	L	E	M	P	A	A	Q	L	T	L	R	M	M	C	S	E	A	R	I	D	M	N	R	V	R	L	T	D	R	D	F	S	R	L	V	D	V	A	S	R	L	S	E	A	P	I	Y	I	D	D	T	P	D	L	T	L	M	E	V	R	A	R	A	R	R	L	V	S	Q	N
Template Known Secondary structure			S										S	S														T	T			G	G	G	T																		T	T									T	T		B
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	I	R	M	K	I	G	V	M	F	G	N	P	E	T	.	.	.	T	T	G	G	N
Query Conservation																																																																										.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	G	L	I	I	I	D	Y	L	Q	L	M	S	G	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	Q	E	I	A	A	I	S	R	G	L	K	A	L	A	R	E	L	G	I	P	I	I	A	L	S	Q	L	S	R	A	V	E	A	R	P	N	K	R	P	M	L	S	D	L	R	E	S	G
Template Known Secondary structure											G	G	G		B				.	.	.	.	.	.	.	.	.	.	.	.	.																				T	S										G	G	G	G	S	S	S	S		S			G	G	G	G	G	G	G	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.														.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I	L	Y	G	E	G	I	N	F	Y	G	E	L
Query Conservation
Alig confidence																															.														.	.	.
Template Conservation																															.														.	.	.
Template Sequence		S	I	E	Q	D	A	D	L	V	M	F	I	Y	R	D	E	Y	Y	N	P	H	S	E	K	A	G	I	A	E	.	I	I	V	G	K	Q	R	N	G	P	T	G	T	.	.	.	V	E	L	Q	F	H	A	S	H	V	R	F	N	D	L
Template Known Secondary structure		S						S													S	S	S	S		T	T				.							S	S	S					.	.	.							T	T	T	T
Template Predicted Secondary structure																															.														.	.	.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.				.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions