Job Description P0A7G6 Confidence 98.24% Date Thu Jan 5 11:05:38 GMT 2012 Rank 76 Aligned Residues 117 % Identity 18% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	.	.	.	.	.	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L
Query Conservation																																																				.	.	.	.	.
Alig confidence																																								.												.	.	.	.	.
Template Conservation																																								.
Template Sequence		K	G	N	V	I	M	F	V	G	L	Q	G	S	G	K	T	T	T	C	S	K	L	A	Y	Y	Y	Q	R	K	G	W	K	T	C	L	I	C	A	.	D	T	F	R	A	G	A	F	D	Q	L	K	Q	N	A	T	K	A	R	I	P	F	Y	G	S	Y	T	E	M	D	P	V	I	I	A	S	E	G	V	E	K
Template Known Secondary structure		S	S								S	T	T	S	S															T	T									.			S	S	S														T										S
Template Predicted Secondary structure																																								.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	N	E	N	F	E	I	I	I	V	D	T	S	G	R	H	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	D	S	L	F	E	E	M	L	Q	V	A	N	A	I	Q	P	D	N	I	V	Y	V	M
Template Known Secondary structure					T	T													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																		S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions