Job Description P0A7G6 Confidence 96.95% Date Thu Jan 5 11:05:38 GMT 2012 Rank 203 Aligned Residues 86 % Identity 27% Template c1yj5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme Resolution 2.80 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G
Query Conservation
Alig confidence																														.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	N	P	E	V	V	V	A	V	G	F	P	G	A	G	K	S	T	F	I	Q	E	H	L	V	S	A	G	.	.	.	.	.	Y	V	H	V	N	R	D	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	W	Q	R	C	V	S	S	C	Q	A	A	L	R	Q	G
Template Known Secondary structure		S	S										T	T	S	S									T	G	G	G	T	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S														T	T
Template Predicted Secondary structure																														.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.						390	.	.	.	.	.	.	.	.																						.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I
Query Conservation
Alig confidence				.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation				.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Sequence		K	R	.	.	V	V	I	D	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	D	V	P	S	R	A	R	.	.	.	.	.	.	.	.	Y	I	Q	C	A	K	D	A	G	V	P	C	R	C	F
Template Known Secondary structure				.	.					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.			S							.	.	.	.	.	.	.	.									T
Template Predicted Secondary structure				.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template SS confidence
		416	.			.	.	420	.	.	.															.	.	.	.	.	.	430	.	.									.	.	.	.	.	.	.	440	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions