Job Description P0A7G6 Confidence 100.00% Date Thu Jan 5 11:05:38 GMT 2012 Rank 7 Aligned Residues 296 % Identity 60% Template c1xp8A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s" Resolution 2.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	K	Q	K	A	L	A	A	A	L	G	Q	I	E	K	Q	F	G	K	G	S	I	M	R	L	G	E	D	R	S	M	D	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	R	S	K	A	I	E	T	A	M	S	Q	I	E	K	A	F	G	K	G	S	I	M	K	L	G	A	E	S	K	L	D	V	Q	V	V	S	T	G	S	L	S	L	D	L	A	L	G	V	G	G	I	P	R	G	R	I	T	E	I	Y	G	P	E	S	G	G	K	T	T	L	A	L	A	I	V	A	Q	A
Template Known Secondary structure																					T	T	S	S			T	T	S												S								T	S	S	S	S			T	T	S							S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H
Query Conservation
Alig confidence																																																																											.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		Q	K	A	G	G	T	C	A	F	I	D	A	E	H	A	L	D	P	V	Y	A	R	A	L	G	V	N	T	D	E	L	L	V	S	Q	P	D	N	G	E	Q	A	L	E	I	M	E	L	L	V	R	S	G	A	I	D	V	V	V	V	D	S	V	A	A	L	T	P	R	A	E	I	P	.	.	.	.	.	.	.
Template Known Secondary structure				T	T								S	S											T	T			G	G	G							S	S													T	T	T			S							T	T	T				S	T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	I	R	M	K	I	G	V	M	F	G	N	P	E	T	T	T	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R
Query Conservation
Alig confidence		.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation		.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		.	G	L	Q	A	R	L	M	S	Q	A	L	R	K	L	T	A	I	L	S	K	T	G	T	A	A	I	F	I	N	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	R	A	L	K	F	Y	A	S	V	R	L	D	V	R	K	I	G	.	.	.	.	.	Q	P	T	V	A	N	T	V	K
Template Known Secondary structure		.																			T	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S									S	.	.	.	.	.
Template Predicted Secondary structure		.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
			177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.						.	.	.	230	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I	L	Y	G	E	G	I	N	F	Y	G	E	L	V	D	L	G	V	K	E	K	L	I	E	K	A	G	A	W	Y	S	Y	K	G	E	K	I	G	Q	G	K	A	N	A	T	A	W	L	K	D	N	P	E	T	A	K	E	I	E	K	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	T	V	K	N	K	V	A	A	P	F	K	E	V	E	L	A	L	V	Y	G	K	G	F	D	Q	L	S	D	L	V	G	L	A	A	D	M	D	I	I	K	K	A	G	S	F	Y	S	Y	G	D	E	R	I	G	Q	G	K	E	K	T	I	A	Y	I	A	E	R	P	E	M	E	Q	E	I	R	D	R	V
Template Known Secondary structure								S	S	S												T	T	T															T	T	S	S				T	T				S	S	S	S					S									T	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		325	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	A	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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