Job Description P0A7G6 Confidence 99.95% Date Thu Jan 5 11:05:38 GMT 2012 Rank 31 Aligned Residues 226 % Identity 20% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		S	M	D	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	.	.	I	Y	A	R	K	L	G	V	D	I
Query Conservation																																																																						.	.
Alig confidence																					.																																																	.	.
Template Conservation																					.
Template Sequence		R	S	S	N	V	R	V	S	S	G	V	V	R	L	D	E	M	C	G	.	G	G	F	F	K	D	S	I	I	L	A	T	G	A	T	G	T	G	K	T	L	L	V	S	R	F	V	E	N	A	C	A	N	K	E	R	A	I	L	F	A	Y	E	E	S	R	A	Q	L	L	R	N	A	Y	S	W	G	M	D	F
Template Known Secondary structure											S								T	T	.	S	S			S	S									T	T	S	S														T	T	T								S	S	S											T	T	S
Template Predicted Secondary structure																					.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		113	.	.	.											.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	L	L	.	.	.	.	.	.	.	.	.	.	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N
Query Conservation						.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.										.	.	.
Template Sequence		E	E	M	E	R	Q	N	L	L	K	I	V	C	A	Y	P	E	S	A	G	L	E	D	H	L	Q	I	I	K	S	E	I	N	D	F	K	P	A	R	I	A	I	D	S	L	S	A	L	A	.	.	.	.	.	.	.	.	.	.	R	G	V	S	N	N	A	F	R	.	.	.	Q	F	V	I	G	V	T	G	Y
Template Known Secondary structure							T	T	S								G	G	G	S															T	T			S											T	.	.	.	.	.	.	.	.	.	.	S	S	S							.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.											.	.	.	.	.	390	.	.	.				.	.	.	.	.	.	400	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	Q	S	N	T	L	L	I	F	I	N	Q	I	R	M	K	I	G	V	M	F	G	N	P	E	T	T	T	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		A	K	Q	E	E	I	T	G	L	F	T	N	T	S	D	Q	F	M	G	.	.	.	.	.	.	.	.	A	H	S	I	T	D	S	H	I	I	T	D	T	I	I	L	L	Q	Y	V	E	I	R	G	.	.	.	.	.	.	E	M	S	R	A	I	N	V	F	K	M	R	G	S	W	H	D	K	A	I	R	E	F
Template Known Secondary structure					T	T										S	S	S	S		.	.	.	.	.	.	.	.			S	S		S	S					S											T	T	.	.	.	.	.	.												S	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.									.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.							.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	Y	G	E	G	I	N	F	Y	G	E	L	V	D	L	G	V	K	E	K	L	I	E	K	A	G	A	W
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		M	I	S	D	K	G	P	D	I	K	D	S	F	R	N	F	.	.	.	E	R	I	I	S	G	S	P	T	R
Template Known Secondary structure					S	S									T	T		.	.	.				T	T	S	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.				.	.	.	490	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions