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Job DescriptionP0A7G6
Confidence97.16%DateThu Jan 5 11:05:38 GMT 2012
Rank173Aligned Residues146
% Identity18%Templatec1q1bD_
PDB info PDB header:transport proteinChain: D: PDB Molecule:maltose/maltodextrin transport atp-binding protein malk; PDBTitle: crystal structure of e. coli malk in the nucleotide-free form
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.........90.........100.........110.........120.......
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Query Sequence  LPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQAL. . . . . . . . .
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Template Sequence  IHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGA
Template Known Secondary structure 

TT

SGGGSTTTSS


SSTT
TT

SSTT



B
S




TTS
TTTTTTSSSS
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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   128.130..... ....140.........150.........160.........170..
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Query Sequence  . . . . . . EICDALAR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . SGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMM
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Template Sequence  KKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNL. . . . . . . . . . . . . . . . DAALR
Template Known Secondary structure  TTTTTTTTTGGGT
TT
SS



GGGTTTSSSSTTTT

S
BSSTTTT
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TTT
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   106...110.........120.........130.........140.........150.........160.... .....
 
   173......180.........190.........200.........210........
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Query Sequence  SQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF
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Template Sequence  VQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQV
Template Known Secondary structure  TT

S

STT
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   170.........180.........190.........200.........210.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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