Return to main results Retrieve Phyre Job Id

Job DescriptionP39343
Confidence96.36%DateThu Jan 5 11:59:33 GMT 2012
Rank92Aligned Residues43
% Identity16%Templated2o38a1
SCOP infolambda repressor-like DNA-binding domains lambda repressor-like DNA-binding domains NE1354
Resolution1.83

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20......... 30.........40...
Predicted Secondary structure 












.



Query SS confidence 




























.













Query Sequence  MRNHRISLQDIATLAGVTKMTVSRYIRSP. KKVAKETGERIAKI
Query Conservation 
  
  

 


  



  






  .  
   

 

   
Alig confidence 




























.













Template Conservation 
   



  

   


   

 

 
     

  
  

  
Template Sequence  IDRARLSQAAAAARLGINQPKVSALRNYKLEGFSVERLXTLLNA
Template Known Secondary structure  TT

T

TT

TT

Template Predicted Secondary structure 













Template SS confidence 











































   47..50.........60.........70.........80.........90
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions