Job Description P39343 Confidence 83.28% Date Thu Jan 5 11:59:33 GMT 2012 Rank 480 Aligned Residues 34 % Identity 21% Template d1rp3a2 SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	L	Q	D	I	A	T	L	A	G	V	T	K	M	T	V	S	R	Y	I	R	S	P	K	K	V	A	K	E	T	G	E	R	I	A	K	I	M	E	E
Query Conservation
Alig confidence																							.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		L	P	A	K	E	V	A	K	I	L	E	T	S	V	S	R	V	S	Q	L	K	.	.	.	.	.	.	.	A	K	A	L	E	R	L	R	E	M	L	S	N
Template Known Secondary structure											T	T	S										.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.								.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions