Return to main results Retrieve Phyre Job Id

Job DescriptionP39343
Confidence96.66%DateThu Jan 5 11:59:33 GMT 2012
Rank85Aligned Residues42
% Identity14%Templatec3t76A_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator vanug; PDBTitle: crystal structure of transcriptional regulator vanug, form ii
Resolution1.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40...
Predicted Secondary structure 
















Query SS confidence 










































Query Sequence  MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKI
Query Conservation 
  
  

 


  



  






    
   

 

   
Alig confidence 




























.












Template Conservation    


 

  

   


  

  

 
 .  
   
  
   
Template Sequence  LIDRDXKKGELREAVGVSKSTFAKLGKNE. NVSLTVLLAICEY
Template Known Secondary structure  TT

T

TT
.


Template Predicted Secondary structure 








.


Template SS confidence 










































   12.......20.........30.........40 .........50...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions