Job Description P39343 Confidence 99.90% Date Thu Jan 5 11:59:33 GMT 2012 Rank 63 Aligned Residues 250 % Identity 12% Template c3rotA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc sugar transporter, periplasmic sugar binding protein; PDBTitle: crystal structure of abc sugar transporter (periplasmic sugar binding2 protein) from legionella pneumophila Resolution 1.91 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																						.	.																														.	.
Query SS confidence																																						.	.																														.	.
Query Sequence		T	L	G	I	L	I	P	S	F	Q	N	Q	L	F	A	D	I	L	A	G	I	E	S	V	T	S	E	H	N	Y	Q	T	L	I	A	N	.	.	Y	N	Y	D	R	D	S	E	E	E	S	V	I	N	L	L	S	Y	N	I	D	G	I	I	L	S	E	K	Y	.	.	H	T	I	R	T	V	K	F	L	R	S
Query Conservation																																						.	.																														.	.
Alig confidence																																						.	.																														.	.
Template Conservation
Template Sequence		K	Y	Y	L	I	T	H	G	S	Q	D	P	Y	W	T	S	L	F	Q	G	A	K	K	A	A	E	E	L	K	V	D	L	Q	I	L	A	P	P	G	A	N	D	V	P	K	Q	V	Q	F	I	E	S	A	L	A	T	Y	P	S	G	I	A	T	T	I	P	S	D	T	A	F	S	K	S	L	Q	R	A	N	K
Template Known Secondary structure								S				S																		T									S	S	S																T			S									S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure														.	.	.	.																										.	.
Query SS confidence														.	.	.	.																										.	.
Query Sequence		A	T	I	P	V	V	E	L	M	D	V	Q	.	.	.	.	G	E	R	L	D	M	E	V	G	F	D	N	R	Q	A	A	F	D	M	V	C	T	M	L	E	.	.	K	R	V	R	H	K	I	L	Y	L	G	S	K	D	D	T	R	D	E	Q	R	Y	Q	G	Y	C	D	A	M	M	L	H	N	L	S	P	L
Query Conservation														.	.	.	.																										.	.
Alig confidence														.	.	.	.																										.	.																																				.	.
Template Conservation																																																																																.	.
Template Sequence		L	N	I	P	V	I	A	V	D	T	R	P	K	D	K	T	K	N	P	Y	L	V	F	L	G	S	D	N	L	L	A	G	K	K	L	G	E	K	A	L	E	L	T	P	S	A	K	R	A	L	V	L	N	P	Q	P	G	H	I	G	L	E	K	R	A	Y	G	I	K	T	I	L	Q	D	K	G	I	F	.	.
Template Known Secondary structure			T							S				S		T	T	T	S			S																							T	T									S		T	T																		T	T			.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290
Predicted Secondary structure																																																			.																									.	.	.
Query SS confidence																																																			.																									.	.	.
Query Sequence		R	M	N	P	R	A	I	S	S	I	H	L	G	M	Q	L	M	R	D	A	L	S	A	N	P	D	L	D	G	V	F	C	T	N	D	D	I	A	M	G	A	L	L	L	C	R	E	R	N	.	L	A	V	P	E	Q	I	S	I	A	G	F	H	G	L	E	I	G	R	Q	M	I	P	S	.	.	.	L	A	S
Query Conservation																																																			.																									.	.	.
Alig confidence																																																			.																									.	.	.
Template Conservation
Template Sequence		F	E	E	L	D	V	G	T	D	P	N	Q	V	Q	S	R	V	K	S	Y	F	K	I	H	P	E	T	N	I	I	F	C	L	T	S	Q	A	L	D	P	L	G	Q	X	L	L	H	P	D	R	Y	D	F	N	Y	Q	P	Q	V	Y	S	F	D	K	T	P	N	T	V	S	L	I	H	K	K	L	V	N	Y	V
Template Known Secondary structure									S																	T	T							S	S													S					T																						T	T	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	T	P	R	F	D	I	G	R	M	A	A	Q	M	L	L	S	K	I	K	N	N	D	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	D	Q	Q	P	F	L	X	G	Y	L	S	I	T	Q	L	V	L	X	N	R	Y	Q	L	N	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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