Return to main results Retrieve Phyre Job Id

Job DescriptionP39343
Confidence86.34%DateThu Jan 5 11:59:33 GMT 2012
Rank452Aligned Residues25
% Identity36%Templatec3r4kD_
PDB info PDB header:dna binding proteinChain: D: PDB Molecule:transcriptional regulator, iclr family; PDBTitle: crystal structure of a putative iclr transcriptional regulator2 (tm1040_3717) from silicibacter sp. tm1040 at 2.46 a resolution
Resolution2.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.......
Predicted Secondary structure 








Query SS confidence 
























Query Sequence  NHRISLQDIATLAGVTKMTVSRYIR
Query Conservation   
  

 


  



  






Alig confidence 
























Template Conservation      

 


  


  

  


 
Template Sequence  RLEIGLSDLTRLSGXNKATVYRLXS
Template Known Secondary structure  BS

S
Template Predicted Secondary structure 







Template SS confidence 
























   18.20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions