Return to main results Retrieve Phyre Job Id

Job DescriptionP39343
Confidence89.94%DateThu Jan 5 11:59:33 GMT 2012
Rank373Aligned Residues44
% Identity18%Templatec3mklB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:hth-type transcriptional regulator gadx; PDBTitle: crystal structure of dna-binding transcriptional dual regulator from2 escherichia coli k-12
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30..... ....40.......
Predicted Secondary structure 














...
Query SS confidence 
































. . .











Query Sequence  NHRISLQDIATLAGVTKMTVSRYIRSPKKVAKE. . . TGERIAKIMEEI
Query Conservation   
  

 


  



  






    
   ...

 

   
  
Alig confidence 


























.




...











Template Conservation       
  

     
   
 
 

  .
 
        
   
   
Template Sequence  AHEWTLARIASELLXSPSLLKKKLREE. ETSYSQLLTECRXQRALQLI
Template Known Secondary structure  TS


TS
T.T

T
Template Predicted Secondary structure 







.


Template SS confidence 















































   156...160.........170.........180.. .......190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions