Job Description P39343 Confidence 99.93% Date Thu Jan 5 11:59:33 GMT 2012 Rank 56 Aligned Residues 256 % Identity 15% Template c3h75A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:periplasmic sugar-binding domain protein; PDBTitle: crystal structure of a periplasmic sugar-binding protein from the2 pseudomonas fluorescens Resolution 1.60 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		S	Y	T	L	G	I	L	I	P	S	F	Q	N	Q	L	F	A	D	I	L	A	G	I	E	S	V	T	S	E	H	N	Y	Q	T	L	I	A	N	Y	N	Y	D	R	D	S	E	E	E	S	V	I	N	L	L	S	Y	N	I	D	G	I	I	L	.	.	.	S	E	K	Y	H	T	I	R	T	V	K	F	L	R
Query Conservation																																																																	.	.	.
Alig confidence																																																																	.	.	.
Template Conservation
Template Sequence		T	S	V	V	F	L	N	P	G	N	S	T	E	T	F	W	V	S	Y	S	Q	F	X	Q	A	A	A	R	D	L	G	L	D	L	R	I	L	Y	A	E	R	D	P	Q	N	T	L	Q	Q	A	R	E	L	F	Q	G	R	D	K	P	D	Y	L	X	L	V	N	E	Q	Y	V	A	P	Q	I	L	R	L	S	Q
Template Known Secondary structure										S		T	T																			T									T	T															S	S	S			S								S	S										T
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																			.	.																										.	.	.	.	.	.	.
Query SS confidence																			.	.																										.	.	.	.	.	.	.
Query Sequence		S	A	T	I	P	V	V	E	L	M	D	V	Q	G	E	R	L	.	.	D	M	E	V	G	F	D	N	R	Q	A	A	F	D	M	V	C	T	M	L	E	K	R	V	R	.	.	.	.	.	.	.	H	K	I	L	Y	L	G	S	K	D	D	T	R	D	E	Q	R	Y	Q	G	Y	C	D	A	M	M	L	H	N
Query Conservation																			.	.																										.	.	.	.	.	.	.
Alig confidence																			.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	G	I	K	L	F	I	V	N	S	P	L	T	L	D	Q	R	W	I	G	S	X	V	G	D	D	E	E	A	G	Y	R	X	L	K	E	L	L	H	K	L	G	P	V	P	A	G	H	G	I	E	L	L	A	F	S	G	L	K	V	T	P	A	A	Q	L	R	E	R	G	L	R	R	A	L	A	E	H	P
Template Known Secondary structure		T	S									S				T	T	T																														S	S										S		T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		L	S	P	L	R	M	N	P	R	A	I	S	S	I	H	L	G	M	Q	L	M	R	D	A	L	S	A	N	P	D	L	D	G	V	F	C	T	N	D	D	I	A	M	G	A	L	L	L	C	R	E	R	N	L	A	V	P	E	Q	I	S	I	A	G	F	H	G	L	E	.	.	I	G	R	Q	M	I	P	S	L
Query Conservation																																																																							.	.
Alig confidence																																																																							.	.
Template Conservation
Template Sequence		Q	V	H	L	R	Q	L	V	Y	G	E	W	N	R	E	R	A	Y	R	Q	A	Q	Q	L	L	K	R	Y	P	K	T	Q	L	V	W	S	A	N	D	E	X	A	L	G	A	X	Q	A	A	R	E	L	G	R	K	P	G	T	D	L	L	F	S	G	V	N	S	S	P	E	A	L	Q	A	L	I	D	G	K	L
Template Known Secondary structure		T										T	T																	T	T							S	S														T	T			B	T	T	T	B						S												T	S	S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	V	I	T	P	R	F	D	I	G	R	M	A	A	Q	M	L	L	S	K	I	K	N	N	D	H	N	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	L	E	A	G	H	F	T	L	G	G	W	A	L	V	A	L	H	D	D	A	L	G	L	D	A	R	R	L
Template Known Secondary structure								G	G	G														T	T			S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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