Job Description P39343 Confidence 89.92% Date Thu Jan 5 11:59:33 GMT 2012 Rank 376 Aligned Residues 67 % Identity 18% Template c2gqqB_ PDB info PDB header:transcription Chain: B: PDB Molecule:leucine-responsive regulatory protein; PDBTitle: crystal structure of e. coli leucine-responsive regulatory protein2 (lrp) Resolution 3.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		R	I	S	L	Q	D	I	A	T	L	A	G	V	T	K	M	T	V	S	R	Y	I	R	S	P	K	K	V	A	K	E	T	G	E	R	I	A	K	I	M	E	E	I	.	.	.	N	Y	I	P	N	R	A	P	G	M	L	L	N	A	Q	S	Y	T	L	G	I	L	I	P	S	F	Q	N	Q	L	F	A	D	I
Query Conservation																																													.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	S	N	V	E	L	S	K	R	V	G	L	S	P	T	P	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	R	V	R	R	L	E	R	Q	G	F	I	Q	G	Y	T	A	L	L	N	P	H	Y	L	D	A	S	L	L	V	F	V	E	I	T	L	N	R	G	A	P	D	V	F	E	Q	F
Template Known Secondary structure		S										S	S	S		T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T									S	S										T	T	T	T	T															S	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.															.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		82	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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