 |
Job Description | P62556 | Confidence | 87.86% | Date | Thu Jan 5 12:07:37 GMT 2012 |
Rank | 393 | Aligned Residues | 91 |
% Identity | 13% | Template | d2bv3a2 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| G proteins
|
Resolution | 2.5 |
|
 |
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | |
|
. | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | D | Y | D | V | I | V | I | D | S | A | P | N | . |
. |
L | G | I | G | T | I | N | V | V | C | A | A | D | V | L | I | V | P | T | P | A | E | L | F | D | Y | T | S | A | L | Q | F | F | D | M | L | R | D | L | L | K | N | V | D | L | K | G | F | E | P | D | V | R | I | L | L | T | K | Y | S | N | S | N | G | S |
Query Conservation |   |
  |   |
|
|   |
|
|
|
|   |
|
|   | . | . |
|   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |
|
|   |
|   | . |   |   |   |
Template Sequence |   |
K | D | H | R | I | N | I | I | D | A | P | G | H | V | D | F | T | I | E | V | E | R | S | M | R | V | L | D | G | A | I | V | V | F | D | S | S | Q | G | V | E | P | Q | S | E | T | V | W | R | Q | A | E | K | Y | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
V | P | R | I | A | F | A | N | K | M | D | K | . |
T | G | A |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |
|
|
| S | S | S | S |
| S | T | T |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | T | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
| T | T | S | . | T | T |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
| . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | |
. | . | . |
  |
  |   |
311 | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | S | P | W | M | E | E | Q | I | R | D | A | W | G | S | M | V | L | K | N | V | V | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | L | W | L | V | I | R | T | M | Q | E | R | L | G | A | R | P | V | V | M | Q | L | P |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|