Return to main results Retrieve Phyre Job Id

Job DescriptionP62556
Confidence95.19%DateThu Jan 5 12:07:37 GMT 2012
Rank176Aligned Residues51
% Identity27%Templated1r8ea1
SCOP infoPutative DNA-binding domain Putative DNA-binding domain DNA-binding N-terminal domain of transcription activators
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60..... ....70.........80.........90....
Predicted Secondary structure 





.

















Query SS confidence 

























.




























Query Sequence  WRIGEAADLVGVSSQAIRDAEKAGRL. PHPDMEIRGRVEQRVGYTIEQINHMRDVF
Query Conservation        
 


     
         .
                  
    

   
Alig confidence 

























.








....















Template Conservation 


 
 
   


  





  


 
   
   
....

 
    
  
  
 
Template Sequence  YSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTS. . . . YRYYTDSQLIHLDLIK
Template Known Secondary structure  T

TTSS

S
TTT
....
TGGGG
Template Predicted Secondary structure 

















....




Template SS confidence 























































   6...10.........20.........30.........40. ........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions