 |
Job Description | P62556 | Confidence | 93.44% | Date | Thu Jan 5 12:07:37 GMT 2012 |
Rank | 258 | Aligned Residues | 45 |
% Identity | 27% | Template | c3ld9D_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:thymidylate kinase; |
PDBTitle: crystal structure of thymidylate kinase from ehrlichia chaffeensis at2 2.15a resolution
|
Resolution | 2.15 Å |
|
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | F | P | P | V | I | G | V | A | A | H | K | G | G | V | Y | K | T | S | V | S | V | H | L | A | Q | D | L | A | L | K | G | L | R | V | L | L | V | E | G | N | D | P | Q | G | T |
Query Conservation |   |
  |   |   |   |
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |
|
|
| . |   |
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | G | S | M | F | I | T | F | E | G | . |
I | D | G | S | G | K | T | T | Q | S | H | L | L | A | E | Y | L | S | E | I | Y | G | V | N | N | V | V | L | T | R | E | P | G | G | T |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |
| . | S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  | S | S |
| S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|