Job Description P62556 Confidence 78.78% Date Thu Jan 5 12:07:37 GMT 2012 Rank 489 Aligned Residues 103 % Identity 15% Template c3ew8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:histone deacetylase 8; PDBTitle: crystal structure analysis of human hdac8 d101l variant Resolution 1.80 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		S	V	H	L	A	Q	D	L	A	L	K	G	L	R	V	L	L	V	E	G	N	D	P	Q	G	T	A	S	M	Y	H	G	W	V	P	D	L	H	I	H	A	E	D	T	L	L	P	F	Y	L	G	E	K	D	D	V	T	Y	A	I	K	P	T	C	.	.	.	W	P	G	L	D	I	I	P	S	C	L	A	L
Query Conservation																																																																		.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	L	G	I	L	R	L	R	R	K	F	E	R	I	L	Y	V	D	L	D	L	H	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	V	E	D	A	F	S	F	T	S	K	V	M	T	V	S	L	H	K	F	S	P	G	F	F	P	G	T	G	D	V	S	D	V	G	L	G
Template Known Secondary structure										T	T	T		S								S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T		S	S											T	T		T	T					T	T					G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		H	R	I	E	T	E	L	M	G	K	F	D	E	G	K	L	P	T	D	P	H	L	M	L	R	L	A	I	E	T	V	A	H	D	Y	.	.	D	V	I	V	I	D	S	A
Query Conservation																																					.	.
Alig confidence																																					.	.
Template Conservation
Template Sequence		K	G	R	Y	Y	S	V	N	V	P	I	Q	D	G	I	Q	D	E	K	Y	Y	Q	I	C	E	S	V	L	K	E	V	Y	Q	A	F	N	P	K	A	V	V	L	Q	L	G
Template Known Secondary structure		G	G	T	T	S								T	T																								S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions