Return to main results Retrieve Phyre Job Id

Job DescriptionP62556
Confidence84.42%DateThu Jan 5 12:07:37 GMT 2012
Rank426Aligned Residues31
% Identity35%Templatec3dl8B_
PDB info PDB header:protein transportChain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca
Resolution7.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.
Predicted Secondary structure 









Query SS confidence 






























Query Sequence  VAAHKGGVYKTSVSVHLAQDLALKGLRVLLV
Query Conservation 
 
 







 
 


  

  
 




Alig confidence 






























Template Conservation 



 






   


 
 

 
  
 

Template Sequence  IAEMKTGEGKTLTSTLPVYLNALTGKGVHVV
Template Known Secondary structure 

SSSS
TTTSS
Template Predicted Secondary structure 








Template SS confidence 






























   97..100.........110.........120.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions