Job Description P62556 Confidence 93.64% Date Thu Jan 5 12:07:37 GMT 2012 Rank 248 Aligned Residues 82 % Identity 16% Template c3cb4D_ PDB info PDB header:translation Chain: D: PDB Molecule:gtp-binding protein lepa; PDBTitle: the crystal structure of lepa Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		H	D	Y	D	V	I	V	I	D	S	A	P	N	L	G	.	.	I	G	T	I	N	V	V	C	A	A	D	V	L	I	V	P	T	P	A	E	L	F	D	Y	T	S	A	L	Q	F	F	D	M	L	R	D	L	L	K	N	V	D	L	K	G	F	E	P	D	V	R	I	L	L	T	K	Y	S	N	S	N	G	S
Query Conservation																	.	.
Alig confidence																	.	.																																						.	.	.	.	.	.	.	.	.													.
Template Conservation																																																								.	.	.	.	.	.	.	.	.													.
Template Sequence		E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	.	.	.	.	.	.	.	.	.	D	L	E	V	V	P	V	L	N	K	I	D	.	L	P	A	A
Template Known Secondary structure															G	G	G												S								T	T	T				T												T	.	.	.	.	.	.	.	.	.	T										T	T	.	S	T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.													.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.										.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	P	W	M	E	E	Q	I	R	D	A	W	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	E	R	V	A	E	E	I	E	D	I	V	G
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions